DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and pmpcb

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001012514.1 Gene:pmpcb / 503532 ZFINID:ZDB-GENE-050220-10 Length:470 Species:Danio rerio


Alignment Length:409 Identity:91/409 - (22%)
Similarity:170/409 - (41%) Gaps:21/409 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVG 101
            |:|.|.||:.|:.|....|.|.:.||||.|:....|.:|.|.......|:..:...:...|:.:|
Zfish    49 LDNGLRVASEDSGLSTCTVGLWIDAGSRYENEHNNGTAHFLEHMAFKGTRKRSQLDLELEIENMG 113

  Fly   102 GTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQ-PAFKPWELVDNAKTVVNQLNAVST--EER 163
            ..|..:..||...|.....:.:....:..|.|::| ......|:......::.::..|.|  :|.
Zfish   114 AHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEV 178

  Fly   164 AIELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGV-GIDNNTLAGFAQ 226
            ..:.:|..|:: ..||.:|..|...:..::...|:.|:...:...|..:... |:.:|.|...|:
Zfish   179 VFDYLHATAYQETPLGRTILGPTENIKTINRGDLVEYITTHYKGPRIVLAAAGGVSHNQLIDLAK 243

  Fly   227 ----TLQFPSGGSKAASANWYGGDAR-KDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAK 286
                .|.....|......::.|.:.| :|.....|.:|||.: |...:|.:.:...:....:|  
Zfish   244 YHFGKLPARYSGEALLPCHFTGSEIRVRDDKMPLAHIAVAVE-AVGWSHPDTIPLMVANTLIG-- 305

  Fly   287 AATKRGTSAGLFGEA----VNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGL 347
             ...|....|:...:    ::|.|.:..|.::.|..|:|.||:|..:..:...:...:.|.....
Zfish   306 -NWDRSLGGGMNLSSKLAQMSCQGNLCHSFQSFNTCYTDTGLWGLYMVCEPGTVHDMIRFTQLEW 369

  Fly   348 KS--ASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQV 410
            ||  .||::.:|.|.|.|||..::........:.::||||.......:....|...||.|:.:.:
Zfish   370 KSLCTSVTESEVNRAKNLLKTNMLLHLDGSTPICEDIGRQMLCYSRRIPLHELEARIDAINATTI 434

  Fly   411 QEAAKKVGSSKL-AVGAIG 428
            ::...|...:|. |:.|:|
Zfish   435 KDVCLKYIYNKAPAIAAVG 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 90/407 (22%)
pmpcbNP_001012514.1 PqqL 31..458 CDD:440377 91/409 (22%)

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