Protein Alignment UQCR-C2 and Pmpca

DIOPT Version :10

• Sequence 1: NP_648905.1
• Gene: UQCR-C2 / 39846
• FlyBaseID: FBgn0250814
• Length: 440
• Species: Drosophila melanogaster
• Sequence 2: XP_038960652.1
• Gene: Pmpca / 296588
• RGDID: 727897
• Length: 538
• Species: Rattus norvegicus
• Alignment Length: 468
• Identity: 103/468 - (22%)
• Similarity: 186/468 - (39%)
• Gaps: 74/468 - (15%)

  Fly    23 PRPV------GDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLL-RLA 80
            |:|:      .:.....|..|:|.|.||:.:.......:.:::.:|||.|:..:.|.:|.| :||
  Rat    65 PKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLA 129

  Fly    81 GGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQD-LLQPAFKPWEL 144
            ...:.:..:...|...:::.||.......|:...|.|:..:...:|.:..|.| :|.|.....|:
  Rat   130 FSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEI 194

  Fly   145 VDNAKTVVNQLNAVS----TEERAIELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLHYVAQTF 204
            ......|..:|..::    .|....|::|:|||| |.:|...:.|...:||:..|.|..|:...:
  Rat   195 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSYLKNYY 259

  Fly   205 AAGRAAVVGVGIDNNTLAGFAQTLQF---PSGGSKAA------SANWYGG--DARKDTSG----- 253
            ...|..:.|||:::..|...|:....   |:.|:..|      .|.:.||  ...:|.|.
  Rat   260 TPDRMVLAGVGVEHEHLVECARKYLLGVQPAWGAPGAVDVDSSVAQYTGGIIKVERDMSNVSLGP 324

  Fly   254 -------HRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGA- 310
                   |    .:.|..:.:...::.:.||:|...:|         ..|.|.     |||.|.
  Rat   325 TPIPELTH----IMVGLESCSFLEEDFIPFAVLNMMMG---------GGGSFS-----AGGPGKG 371

  Fly   311 -----------------SVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRG--LKSASVSDKD 356
                             :..:.:.||.|.||.....|||.:.:.:.||.:.:.  |...:|...:
  Rat   372 MFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVE 436

  Fly   357 VARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSK 421
            :.|.|..|.:.::....|...:.:::|||...|.:......|...|..:....::..|.|:...|
  Rat   437 LERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGK 501

  Fly   422 LAVGAIGHLANVP 434
            .||.|:|.|.::|
  Rat   502 PAVAALGDLTDLP 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-C2	NP_648905.1	PqqL	23..428	CDD:440377	100/460 (22%)
Pmpca	XP_038960652.1	PqqL	75..509	CDD:440377	98/451 (22%)