DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and Uqcrc2

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001006971.1 Gene:Uqcrc2 / 293448 RGDID:1359150 Length:452 Species:Rattus norvegicus


Alignment Length:418 Identity:144/418 - (34%)
Similarity:222/418 - (53%) Gaps:22/418 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVG 101
            |.|.||:|:.:...|:||:.|.:.||||.|:|:..|.|||||||..|:|:.:::|.|.|.|:.||
  Rat    42 LPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIEAVG 106

  Fly   102 GTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAFKPWEL--------VDNAKTVVNQLNA 157
            |.|:....||.:.|||....|:.|..:.:|.:: ..|.|:.||:        :|.|....|    
  Rat   107 GKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQN---- 167

  Fly   158 VSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGIDNNTLA 222
              .:.|.||.:|..|::|.|.|.:|.|.:::||::||.|.::|...|.:.|.|:||:|:.::.|.
  Rat   168 --PQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGVSHSILK 230

  Fly   223 GFA-QTLQFPSG-GSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGA 285
            ..| |.|....| |...|.|.:.||:.|:....:....|:..:.||..| .||.||::|:..|||
  Rat   231 EVAEQFLNIRGGLGLAGAKAKYRGGEIREQNGDNLVHAAIVAESAAIGN-AEANAFSVLQHLLGA 294

  Fly   286 KAATKRG-TSAGLFGEAVNCAGGVGASVKAVNASYSDAGLFG-FVVS--ADSKDIGKTVEFLVRG 346
            ....||| .:..|..::|.........|.|.||||||:|||| :.||  |.:.|:.......|:.
  Rat   295 GPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKA 359

  Fly   347 LKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQ 411
            :...::|..||...|..|||..:....:..|.:.|||.||..|.:.:....:|..||.::.:.|.
  Rat   360 VAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVV 424

  Fly   412 EAAKKVGSSKLAVGAIGHLANVPYASDL 439
            :||||..|.|.::.|.|:|.:.|:..:|
  Rat   425 KAAKKFVSGKKSMTASGNLGHTPFLDEL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 140/405 (35%)
Uqcrc2NP_001006971.1 PqqL 24..439 CDD:440377 139/403 (34%)

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