DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and qcr2

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_587698.1 Gene:qcr2 / 2538983 PomBaseID:SPCC613.10 Length:426 Species:Schizosaccharomyces pombe


Alignment Length:407 Identity:95/407 - (23%)
Similarity:166/407 - (40%) Gaps:47/407 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTT 119
            :|:|:.||||.:  ...|.||||......:|:..:|..|.|..:.:||.|:|...||.:..|...
pombe    45 LSVVINAGSRYQ--PDAGVSHLLEKFAFKTTEERSALRITRESELLGGQLSTQITREHIILTARF 107

  Fly   120 TADNAETGLRYLQDLLQPA-FKPWELVDN---AKTVVNQLNAVSTEERAIELVHKAAFRNGLGNS 180
            ..:..|...|.|.:::... |.|::|.:.   ...:.::|........|:..:|:.||..|:||.
pombe   108 LNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESELFREDILRVAMAKLHEKAFHRGIGNE 172

  Fly   181 IYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGID----NNTLAGFAQTLQFPSGGS-KAASA 240
            :|.|......:|  .:..:.::.:.....:|:..|.|    ::..|.:...:  |.|.. |:|..
pombe   173 VYLPASASPSIS--EIKDFASKAYVKSNFSVISSGPDVQKASDLCAKYFAVI--PDGSPLKSAPT 233

  Fly   241 NWYGGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGEAVNCA 305
            ....|::|..:.|..  ....|..|.|::.:    ..:|...||..||.|......|..:|...|
pombe   234 KISSGESRVYSKGTN--YFCLGFPAPAASPE----LFVLSSILGGDAAVKWSHGNTLLAKAAGTA 292

  Fly   306 GGVGASVKAVNASYSDAGLFGFVVSAD-SKDIGKTVEFLVRGLKSAS--VSDKDVARGKALLKAR 367
            ....|:..|....||||.|...|:|.. .|.|..|.....:.|||.|  :.:..|..|.|:.|.:
pombe   293 SEYKATAVADLTPYSDASLLSVVISGSCPKAIKATASESFKALKSLSSNIPNDVVKSGIAMAKTK 357

  Fly   368 IISRYSSDGGLIKEIGRQAALTRNVLEA----------DALLGAIDGISQSQVQEAAKKVGSSKL 422
            .:|.:.             .:|.|.:.|          ||.:...|.::.:.:.:....:.:...
pombe   358 YLSAFE-------------PVTLNAISASSLVSASKGSDAFISGFDKVTPASISKVVSSLLAKPA 409

  Fly   423 AVGAIGHLANVPYASDL 439
            :..|:|:|..:||..:|
pombe   410 STVAVGNLDVLPYYDEL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 90/394 (23%)
qcr2NP_587698.1 PqqL 36..414 CDD:440377 89/393 (23%)
Peptidase_M16 38..165 CDD:425812 31/121 (26%)

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