DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and mppb-1

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_501576.2 Gene:mppb-1 / 177725 WormBaseID:WBGene00013880 Length:458 Species:Caenorhabditis elegans


Alignment Length:444 Identity:82/444 - (18%)
Similarity:165/444 - (37%) Gaps:53/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLRAIAKRGYATCPRPVGDLSAVNVKV-------LENKLVVATADATLPVSRVSLVLGAGSRNES 67
            :.|.:|...|.|..|.:..:...:|.|       |.|...|||.:.....:.:.:.:.||||.|:
 Worm     1 MYRRLASGLYQTSQRRIAQVQPKSVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYEN 65

  Fly    68 YDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQ 132
            ....|.:|.|.......|...|...:...::.:|..|..:..||...|......:..:..:..|.
 Worm    66 EKNNGTAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILS 130

  Fly   133 D-LLQPAFKPWELVDNAKTVVNQLNAVST--EERAIELVHKAAFR-NGLGNSIYSPRFQLGKLSS 193
            | ||..:....::......::.::..|:.  :|...:::|...|: |.|..:|..|...:..::.
 Worm   131 DILLNSSLATKDIEAERGVIIREMEEVAQNFQEVVFDILHADVFKGNPLSYTILGPIELIQTINK 195

  Fly   194 ESLLHYVAQTFAAGRAAVVGV-GIDNNTLAGFAQ----TLQFPSGGSKAASANWYGGDARKDTSG 253
            ..|..|:...:.:||..:... |::::.:...|:    .|:.....::...|.:...:.|.|...
 Worm   196 NDLQGYINTHYRSGRMVLAAAGGVNHDAIVKMAEKYFGELKHGDSSTEFVPATYSPCEVRGDIPD 260

  Fly   254 HRAVVAVAGQGAAASNHKEALAFAILEQALG-------------AKAATKRGTSAGLFGEAVNCA 305
            ...:.........:..|::.||..:....:|             .:.|.|....||:        
 Worm   261 LPMLYGAMVVEGVSWTHEDNLALMVANTLMGEYDRMRGFGVNAPTRLAEKLSQDAGI-------- 317

  Fly   306 GGVGASVKAVNASYSDAGLFG--FVVSADSKD--IGKTVE---FLVRGLKSASVSDKDVARGKAL 363
                ...::.|..|.:.||.|  ||.:.:|.|  |...::   :|...:..|:|.     |.|..
 Worm   318 ----EVFQSFNTCYKETGLVGTYFVAAPESIDNLIDSVLQQWVWLANNIDEAAVD-----RAKRS 373

  Fly   364 LKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKV 417
            |...::........:.::||||.......:....|...|:.|:..|:::..::|
 Worm   374 LHTNLLLMLDGSTPVCEDIGRQLLCYGRRIPTPELHARIESITVQQLRDVCRRV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 78/431 (18%)
mppb-1NP_501576.2 PqqL 27..442 CDD:440377 76/418 (18%)

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