DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and ucr-2.3

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_497284.1 Gene:ucr-2.3 / 175248 WormBaseID:WBGene00020757 Length:427 Species:Caenorhabditis elegans


Alignment Length:439 Identity:124/439 - (28%)
Similarity:194/439 - (44%) Gaps:51/439 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNS 88
            :|.|.|..    .|.|.|.|.:.:....:|::.|...||||.|.....|..|.:|...|...|:.
 Worm    17 KPTGSLKT----KLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVHHVRNFVGRDAQSY 77

  Fly    89 TAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAFKPWELVDNAKTVV 152
            ....:..:....|..|.::..|::.|..::...|.|...|..|..: .:||||||||.|...|::
 Worm    78 PGLQLVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSILGHVAAKPAFKPWELEDVTPTIL 142

  Fly   153 NQLNAVSTEERAIELVHKAAFRN-GLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGI 216
            ..|:..:......|.:|:||||| .|..|:||.:.|:|...|:.|..:.|:.|.:|.|.:||:.:
 Worm   143 ADLSQKTPYGIVFEDIHRAAFRNDSLSFSLYSSKGQVGAYKSQELAKFAAKHFVSGNAVLVGINV 207

  Fly   217 DNNTLAGFAQTL-QFPSG------GSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHK--- 271
            |.:.|..:|:.. ..|.|      ||.     :.|||.|:...|:...:.|||.|||..:.|   
 Worm   208 DGSILKSYAEECGVVPDGHIITNQGSP-----FRGGDYRRFARGNDVHIMVAGDGAAVGDLKFLA 267

  Fly   272 -EALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKD 335
             :|:..|.:.:|...|.|:..|:::||  ...|...||..|  |..|.|..:||.|..:.|...:
 Worm   268 AQAVFLAHIGRASPLKFASLPGSTSGL--ALANLPEGVTGS--AFQAPYDGSGLVGVYLLATGAN 328

  Fly   336 IGKTVEFLVRGLKSASVSDKDVARGKAL------LKARIISRYSSDGGLIKEIGRQAALTRNVL- 393
            ....|...|:.|::..|.|.:..:.:|:      .:..:.|.|.              |..|.| 
 Worm   329 ADSAVRATVKVLRTTQVQDIEGCKRRAIADILFNAENNVYSAYD--------------LATNALY 379

  Fly   394 ---EADALLGAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439
               |...|:..|..|.:|.||:.. |....:||:.|.|:...:|||.:|
 Worm   380 NGPEQSELIAEIQKIQESDVQKYT-KAAFERLAISAYGNYGRIPYADEL 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 119/426 (28%)
ucr-2.3NP_497284.1 PqqL 23..417 CDD:440377 116/421 (28%)

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