Protein Alignment Rpn12 and psmd8

DIOPT Version :10

• Sequence 1: NP_648904.1
• Gene: Rpn12 / 39845
• FlyBaseID: FBgn0028693
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: XP_012823709.1
• Gene: psmd8 / 448645
• XenbaseID: XB-GENE-961854
• Length: 310
• Species: Xenopus tropicalis
• Alignment Length: 265
• Identity: 134/265 - (50%)
• Similarity: 191/265 - (72%)
• Gaps: 3/265 - (1%)

  Fly     1 MANVESLYKELTAEWSKRPPNTVKCGQLLDQLKVALVKMAFLPTDGNDAQSSKKQLILARSVLEV 65
            :..:.::|::|.|||:|:.||..|||.:|.:||:||::..||||  .|.:.:|:||||||.:||:
 Frog    48 LRQLAAMYEQLKAEWAKKNPNLSKCGDVLGKLKLALLEQNFLPT--TDVKLTKQQLILARDILEI 110

  Fly    66 AVEHSVLSKDLLAFERYMAQLKCYYYDYAKIIGESESKYKLLGLNLLYLLSGNRVSDFHTELELL 130
            ..:.|:|.||:.:||||||||||||:||...:.||..|::|||||||:|||.|||:|||||||.|
 Frog   111 GAQWSILKKDIPSFERYMAQLKCYYFDYKDELPESAYKHQLLGLNLLFLLSQNRVADFHTELERL 175

  Fly   131 SVDVIQHNQFIRPILALEQYIMEGRYNKIFQAKSTVPVEVYSYFMDLLLETVRDEIGACIEKSYD 195
            ....||.|.:|:..::||||:|||.|||:|.||..:|.|.|::|:|:||:|:||||..||||:|.
 Frog   176 PAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIADCIEKAYG 240

  Fly   196 KISAKDAAKRLNLRVPDEIKAFGAKRQWKLEASGDYSFTDRSVKPKEL-LPSEELAEQVLSYARD 259
            ||...:|.:.|....|.::..:..||.|.|..:.::||:.:...|:|: :||.|||:||:.|||.
 Frog   241 KILFNEATRILFFNTPKKMTEYAKKRGWVLGPNNNFSFSSQQQNPEEVTIPSTELAKQVIEYARQ 305

  Fly   260 LEMIV 264
            |||||
 Frog   306 LEMIV 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn12	NP_648904.1	CSN8_PSD8_EIF3K	119..229	CDD:462954	53/109 (49%)
psmd8	XP_012823709.1	CSN8_PSD8_EIF3K	161..276	CDD:462954	55/114 (48%)