DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and tcyN

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_416427.1 Gene:tcyN / 946422 ECOCYCID:EG12347 Length:250 Species:Escherichia coli


Alignment Length:240 Identity:73/240 - (30%)
Similarity:119/240 - (49%) Gaps:34/240 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 IQPGTLMALMGSSGSGKTTLMSTL-AFRQP-AGTVVQGDILINGRR--------IGPFMHRISGY 152
            ::||.::|::|.||||||||:.:: ...|| |||:..|||.|:..|        |......: |:
E. coli    26 VKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHV-GF 89

  Fly   153 VYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDD---KK 214
            |:|:.......||||  |.:....:.:...|||.....:|||.:.||         :|.:   .:
E. coli    90 VFQNFNLFPHRTVLE--NIIEGPVIVKGEPKEEATARARELLAKVGL---------AGKETSYPR 143

  Fly   215 VLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQL 279
            .||||:::|:|.|..|...|.::..||||:.||.....:::.|:.:|||:..|::...|:.|...
E. coli   144 RLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFAR 208

  Fly   280 FDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFL 324
             |..:..:.:..||:...|:   |.:.||:     ||......||
E. coli   209 -DVADRAIFMDQGRIVEQGA---AKALFAD-----PEQPRTRQFL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 73/240 (30%)
tcyNNP_416427.1 PRK11264 1..250 CDD:183063 73/240 (30%)

Return to query results.
Submit another query.