DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and PDR18

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_014468.3 Gene:PDR18 / 855807 SGDID:S000005353 Length:1333 Species:Saccharomyces cerevisiae


Alignment Length:658 Identity:179/658 - (27%)
Similarity:298/658 - (45%) Gaps:113/658 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAG 128
            |.....:|:::. :|....||||  :::::.:|...||||.||:|.||:|||||::|||.|. .|
Yeast   724 ESTGVFIWKNVS-FTIPHSSGQR--KLLDSVSGYCVPGTLTALIGESGAGKTTLLNTLAQRN-VG 784

  Fly   129 TVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKE- 192
            |:. ||:|::|..:.....|.:|||.|.||.:..|||.|.|.|.|.:|..:.:...|:...::: 
Yeast   785 TIT-GDMLVDGLPMDASFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQSIPDAEKMEYVEKI 848

  Fly   193 --LLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNP-VILFCDEPTTGLDSYSAQQL 254
              :||......|....||.|     |:..:||:|:..|||:..| ::||.||||:||||.||..:
Yeast   849 ISILEMQEFSEALVGEIGYG-----LNVEQRKKLSIGVELVGKPDLLLFLDEPTSGLDSQSAWAV 908

  Fly   255 VATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLA-DGRVAFTG----SPQHALSFFANHG-YY 313
            |..|..||..|.:|||||||||:.||:.|:.::||. .|:..:.|    :....:.:|..:| ..
Yeast   909 VKMLKRLALAGQSILCTIHQPSATLFEQFDRLLLLGKGGQTIYFGEIGKNSSSVIKYFEKNGARK 973

  Fly   314 CPEAYNPADFL---IGVLAT---DPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLE---IHMA 369
            |.:..|||:::   ||..||   ...:....|:|.::      .:...|..||:.:|.   :|..
Yeast   974 CQQNENPAEYILEAIGAGATASVQQNWPDIWQKSHEY------ANINEKINDMIKDLSSTTLHKT 1032

  Fly   370 QSGNFPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEP 434
            .:....:.|        ::..:||.|..|:|||..|:     |.:|....|..:|...|.|.|. 
Yeast  1033 ATRASKYAT--------SYSYQFHHVLKRSSLTFWRN-----LNYIMAKMMLLMISGLFIGFTF- 1083

  Fly   435 SQLGVQAV--QGALF-----IMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANIL 492
            ..:||.|:  |.:||     |:||....:.:.....:..:.:.  :||::|.::........:.|
Yeast  1084 FHVGVNAIGLQNSLFACFMAIVISAPATNQIQERATVAKELYE--VRESKSNMFHWSLLLITHYL 1146

  Fly   493 ALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYL 557
            ..||..::...||.:..|:..|:      |...:...|..:|.|    ..|...:..:.|.:.|:
Yeast  1147 NELPYHLLFSTIFFVSSYFPLGV------FTEASRSSVFYLNYA----ILFQLYYIGLALMILYM 1201

  Fly   558 VP--------LDYI--FMITSGIFIQVNSLPVAFW--------WTQFLS---WMLYANEAMTAAQ 601
            .|        :.:|  |:::....:|..||...||        :|.||.   .:|..::.:..::
Yeast  1202 SPNLQSANVIVGFILSFLLSFCGAVQPASLMPGFWTFMWKLSPYTYFLQNLVGLLMHDKPVRCSK 1266

  Fly   602 WSGVQNITCFQESADLPC---------FHTG----QDVLDKYSFNESNVYRNLLAMVGLYFGFHL 653
                :.::.|.......|         |.||    .|.....::.:..|....||.:...|.:  
Yeast  1267 ----KELSLFNPPVGQTCGEFTKPFFEFGTGYIANPDATADCAYCQYKVGDEYLARINASFSY-- 1325

  Fly   654 LGYYCLWR 661
                 |||
Yeast  1326 -----LWR 1328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 178/655 (27%)
PDR18NP_014468.3 3a01205 1..1333 CDD:273362 179/658 (27%)

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