DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and ABCG8

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_200098.1 Gene:ABCG8 / 835363 AraportID:AT5G52860 Length:589 Species:Arabidopsis thaliana


Alignment Length:602 Identity:164/602 - (27%)
Similarity:267/602 - (44%) Gaps:91/602 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR-ISGYV 153
            |:.|.|....|..::|::|.||:||:||:..||.:.   :...|.||:|...|.|..:| ||.||
plant    44 ILRNITLTAHPTEILAVVGPSGAGKSTLLDILASKT---SPTSGSILLNSIPINPSSYRKISSYV 105

  Fly   154 YQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSG 218
            .|.|.|...|||.|..:|.|.|.|.......|   .:..||....|...:.||:..|     |||
plant   106 PQHDSFFPLLTVSETFSFAACLLLPNPSIVSE---TVTSLLSELNLTHLSHTRLAQG-----LSG 162

  Fly   219 GERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELA-QKGTTILCTIHQPSSQLFDN 282
            |||:|::..:.||::|..|..||||:||||.||..::..|..:| .:..|::.:|||||.::...
plant   163 GERRRVSIGLSLLHDPCFLLLDEPTSGLDSKSAFDVIHILKSIAVSRQRTVILSIHQPSFKILSI 227

  Fly   283 FNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLA--------TD----PGYE 335
            .:.::||:.|.|.:.|.......|....|:..|...|..::.:.:|.        ||    |..|
plant   228 IDRLLLLSKGTVVYHGRLDSLEGFLLFKGFTVPPQLNSLEYAMEILQELRESDGNTDATALPSIE 292

  Fly   336 QASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYKRFHVVWLRAS 400
            ...||..|         |..:.|...:               ||:....     :||..:..|..
plant   293 NRKQREKQ---------SIVRYRKSRI---------------TEISLLA-----RRFWKIIYRTR 328

  Fly   401 LTLLRDPTIQWLRFIQKIAMAFIIGACF-------AGTTEPSQLGVQAVQGALFIMISENTYHPM 458
            ..||.:.       ::.:.:..::|..:       ||..:  :.|:.|.  .|..::|..|    
plant   329 QLLLTNA-------LEALVVGLVLGTIYINIGIGKAGIEK--RFGMFAF--TLTFLLSSTT---- 378

  Fly   459 YSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFG 523
             ..|.:|....|:.:|||.||:|....:..||.|..||.:.:..:|:.:..|:|.||..|:.|||
plant   379 -ETLPIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFG 442

  Fly   524 VTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI------FMITSGIFIQVNSLPVAFW 582
            ...:.:.:::.:|.:...|.|:      ||..|:.....:      |.:.||.||...|||..:.
plant   443 YFVLVIWIILLMANSFVLFLSS------LAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYWL 501

  Fly   583 WTQFLSWMLYANEAMTAAQWSGVQN--ITCFQESADLPCFHTGQDVLDKYSFNESNVYRNLLAMV 645
            :..|.|...||.:|:...::|.:.:  :...:|:....|..||.|||.|...:|...:.|:..::
plant   502 FMYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEKQRWFNVYVLL 566

  Fly   646 GLYFGFHLLGYYCLWRR 662
            |.:..:.:|.:..|.||
plant   567 GFFVLYRVLCFLALLRR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 164/602 (27%)
ABCG8NP_200098.1 3a01204 44..584 CDD:273361 164/602 (27%)

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