DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG21

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001189973.1 Gene:ABCG21 / 822149 AraportID:AT3G25620 Length:672 Species:Arabidopsis thaliana


Alignment Length:667 Identity:191/667 - (28%)
Similarity:315/667 - (47%) Gaps:76/667 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PSLDST-----PKLSKRNSSERSLPLR---------SYSKWSPTEQGATLVWRDLCVYTNVGGSG 84
            |.||..     |....|.||.....||         :||..|.|.:|:  .|        .|...
plant    38 PCLDDDNDHDGPSHQSRQSSVLRQSLRPIILKFEELTYSIKSQTGKGS--YW--------FGSQE 92

  Fly    85 QRMKRIINNS-TGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR 148
            .:..|::... :|.::||.|:|::|.||||||||::.||.|...  .:.|.:..||......:.|
plant    93 PKPNRLVLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQG--KLSGTVSYNGEPFTSSVKR 155

  Fly   149 ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDK 213
            .:|:|.|||:....|||:|.|.:.|.|||.:.::::|:...::.::...||.....:.||.|..:
plant   156 KTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIR 220

  Fly   214 KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQ 278
            .: |||||||::...|:|.||.:|..||||:||||.:|.::||||..||:.|.|::.|||||||:
plant   221 GI-SGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSR 284

  Fly   279 LFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAY-NPADFLI----GVLATDPGYEQ-- 336
            |:..|:.|::|::|...::|.....:.:|.:.||....:: |||||::    |:.:....|:|  
plant   285 LYRMFDKVLVLSEGCPIYSGDSGRVMEYFGSIGYQPGSSFVNPADFVLDLANGITSDTKQYDQIE 349

  Fly   337 ----ASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVA--------WY 389
                ..:...|:...|..:||..|.....:..|:    |..||.|......|..|        |:
plant   350 TNGRLDRLEEQNSVKQSLISSYKKNLYPPLKEEV----SRTFPQDQTNARLRKKAITNRWPTSWW 410

  Fly   390 KRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENT 454
            .:|.|: |:..|......:...||....::::.:.|..:   .......:|...|.||.......
plant   411 MQFSVL-LKRGLKERSHESFSGLRIFMVMSVSLLSGLLW---WHSRVAHLQDQVGLLFFFSIFWG 471

  Fly   455 YHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTF 519
            :.|:::.:..|||..|:.::|..||:|....||.|..:..||..:|.|.|||.|.||:.||:.:.
plant   472 FFPLFNAIFTFPQERPMLIKERSSGIYRLSSYYIARTVGDLPMELILPTIFVTITYWMGGLKPSL 536

  Fly   520 YAFGVTAMCV---VLV-MNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSLPVA 580
            ..|.:|.|.|   ||| ..|..|.|.....|..:..|:...::    :|::..|.:||  .:|..
plant   537 TTFIMTLMIVLYNVLVAQGVGLALGAILMDAKKAATLSSVLML----VFLLAGGYYIQ--HIPGF 595

  Fly   581 FWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFNE---SNVYRNLL 642
            ..|.:::|:..|..:.:...|::..:...|   .:.|.|     .|:|......   .|:..::|
plant   596 IAWLKYVSFSHYCYKLLVGVQYTWDEVYEC---GSGLHC-----SVMDYEGIKNLRIGNMMWDVL 652

  Fly   643 AMVGLYFGFHLLGYYCL 659
            |:..:...:.:|.|..|
plant   653 ALAVMLLLYRVLAYLAL 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 177/620 (29%)
ABCG21NP_001189973.1 PLN03211 43..670 CDD:215634 188/662 (28%)

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