DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and abcg2b

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001034155.1 Gene:abcg2b / 570453 ZFINID:ZDB-GENE-050517-36 Length:618 Species:Danio rerio


Alignment Length:650 Identity:179/650 - (27%)
Similarity:315/650 - (48%) Gaps:70/650 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VEQHELQVMPV----GSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDL--C 75
            :|..|::::|.    |:|:.|                 .:|            |..|.::::  |
Zfish     1 MEVCEIKMLPALESDGATVHV-----------------KVP------------GPILTYQNIHYC 36

  Fly    76 VYTNVGGSGQRM--KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILIN 138
            :..:.|...::.  :.|:.|.:|.::.| |.|:||::|||||:|:..:|.|:....:..|.:|::
Zfish    37 IRESRGLCCKKAPERDILKNVSGIMKTG-LNAIMGATGSGKTSLLDVMAGRKDPRGLRSGQVLVD 100

  Fly   139 GRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDR-RVSKEERRLIIKELLERTGLLSA 202
            .:.:...:..:|.||.|||:.:|:|||.|:|.|..:|||.| :.|..:::..::.::|..||...
Zfish   101 NKLVTSDLRLMSAYVVQDDVLMGTLTVRENLLFSGNLRLPREQFSSADKKKKVESIIEELGLEDC 165

  Fly   203 AQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTT 267
            |.|:||: :..:.:|||||||.:..:||:.:|.:||.|||||||||.:|..::|.|:.|::.|.|
Zfish   166 ADTKIGT-EFIRGVSGGERKRCSIGMELITSPTLLFLDEPTTGLDSNTANSIIALLHRLSRGGRT 229

  Fly   268 ILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDP 332
            |:.:||||...:|..|:.:.|:..|...:.|....|:.:|.:.||......|||||.:.:...:.
Zfish   230 IIFSIHQPRYSIFRLFDYLTLMHKGETVYAGPAGKAIDYFQSLGYERDAFNNPADFFLDITNGET 294

  Fly   333 GYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYKRFHVVWL 397
            .....:::|...|..:....:|..:....:...............:.|.||.    |:...|.| 
Zfish   295 ATSMPTEKSLAELYRESQFCTAVDEELKCITGPSDSLSEAKSKAPSYVTSFS----YQLKVVCW- 354

  Fly   398 RASLTLLRDPTIQWLRFIQKIAMAFIIGACF--AGTTEPSQLGVQAVQGALFIMISENTYHPMYS 460
            |..|.::|:|...:.:....|..|.:||..:  ...|.|..|  |...||.|.:|....:..: |
Zfish   355 RTGLNVVRNPQTSYAQIAMNILFALLIGLVYYQMPLTLPEAL--QNRIGAFFFLIINMVFGNL-S 416

  Fly   461 VLNLFPQGFPLFMRETRSGLYSTGQYYAANILA-LLPGMIIEPLIFVIICYWLTGLRSTFYAFGV 524
            .:.||.....:|:.|...|.|.|..|:.:.:.. |||..|:..|||..|.|::.||...|.:|  
Zfish   417 AVELFINERAIFVHENSGGYYRTSVYFLSKVFVDLLPNRIVPILIFSSISYYMMGLNPAFTSF-- 479

  Fly   525 TAMCVVLVMNVATACG---CFFSTAFNSVPLAMA-YLVPLDYIF-MITSGIFIQVNSLPVAFWWT 584
              :|..|.:::.:..|   .|..:|..|. .||| .||.|.::| |:..|..:.:||:.....|.
Zfish   480 --LCFALTVSLVSLAGVSLAFLVSASVST-FAMANILVVLPFVFMMVFGGFLVNLNSMLNWLSWL 541

  Fly   585 QFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFNES--NVYRNLLAMVGL 647
            ::.|...|..:|:|..:..|   :..:..:|.||    |:..|:....:.|  ..::|.:|::|:
Zfish   542 KWTSIFKYGLDAVTINEMKG---LVLYSGNATLP----GELYLESQGIDYSVWGFWQNEVALLGI 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 171/595 (29%)
abcg2bNP_001034155.1 3a01204 41..616 CDD:273361 169/580 (29%)

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