DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg3l4

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001032282.1 Gene:Abcg3l4 / 360997 RGDID:1588538 Length:652 Species:Rattus norvegicus


Alignment Length:625 Identity:171/625 - (27%)
Similarity:289/625 - (46%) Gaps:117/625 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQ-PAGTVVQGDILI 137
            ||..|.|      |:| :::.:|.:.|| |.|:||.....::.|:..||.|: |:|  :.||||:
  Rat    55 LCQKTRV------MER-LSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRHPSG--LSGDILV 109

  Fly   138 NGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSA 202
            ||:.........||||..:|:.:.::||.::|.|.|.|.|...::::|:|..|.|:||...|   
  Rat   110 NGKPRPANFKCTSGYVPHNDVVMHTVTVRDNLEFSAALCLPMTITRDEKRRRINEVLELLHL--- 171

  Fly   203 AQTRIGSGDDK---KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQK 264
                    |:|   |..|...|||.:.||||:.:..|||.|.|||.||..:...:::.|..::.|
  Rat   172 --------DEKQNTKPRSKELRKRTSIAVELIADHPILFLDNPTTYLDFTTTTYVISVLRRMSMK 228

  Fly   265 GTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVL- 328
            |.||:.:|:||...:|..|:::.|:|.|::.|.|..:.||.:|.:.||       ||||.:.:: 
  Rat   229 GKTIIFSINQPQYSIFRFFDSLTLMASGKLMFHGPARDALEYFTSAGY-------PADFFLDIIN 286

  Fly   329 -----ATDPG-----YEQASQRSAQHLCDQFAVSSAAKQR---DMLVNLEIHMAQSGNFPFDTEV 380
                 ..:.|     ||:..:|  |:...:..|:..|:.|   |....|:..:.|. ....::.|
  Rat   287 GGFCDTEEDGHEVGNYEELFER--QYQATKKLVNMYAQSRLHSDTRARLDQILGQQ-QLDRNSAV 348

  Fly   381 ES------FRGVAW--YKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAF---IIGACF-AGTTE 433
            |:      :..:.|  |:.|..:|           ...|...||.:.:|.   :||..| ....:
  Rat   349 ETTCATPFWHQLMWITYRSFKNIW-----------GFPWATVIQAVIIAILAALIGIAFQVLKND 402

  Fly   434 PSQLGVQAVQGALFIMISENTYHPMYSVLN--LFPQGFPLFMRETRSGLYSTGQYYAANILA-LL 495
            .:::.::|  |.|:::   ..:..:.||..  ||......|:.|..||.|....|:...:|| |:
  Rat   403 CNEVRIRA--GLLYLL---TIFQSLTSVFAGVLFVINRHRFLHEHTSGYYRVSCYFFGKLLADLI 462

  Fly   496 PGMIIEPLIFVIICYWLTGLR---STFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAM--- 554
            |..:: |...|:|.|::.|.|   |:|:|...|.|              ....:.:|:||::   
  Rat   463 PRRLL-PSTIVLITYFIAGGRMSMSSFFAMLFTVM--------------MLDFSVSSLPLSIGAG 512

  Fly   555 --AYLVP-----LDYIFM-ITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCF 611
              |..||     :.::|| |.||:.:...|||....|.|:.|.:.||.:|:...::.| ||....
  Rat   513 KNAVAVPTLFVTIYFVFMLIFSGLSLYSGSLPPKLSWIQYFSILHYAFKALLHNEFLG-QNFCSE 576

  Fly   612 QESADLPCFH-----TGQDVLDKYSFNESN--VYRNLLAM 644
            ....:|...|     .|::.|.....:.|:  .:.|.||:
  Rat   577 DRMEELSRCHNYVICAGEEFLAIQGIDLSSWGFWENHLAL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 171/625 (27%)
Abcg3l4NP_001032282.1 3a01204 54..632 CDD:273361 171/625 (27%)

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