DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and wht-5

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_502352.1 Gene:wht-5 / 178182 WormBaseID:WBGene00008950 Length:695 Species:Caenorhabditis elegans


Alignment Length:733 Identity:199/733 - (27%)
Similarity:334/733 - (45%) Gaps:113/733 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DSKRIDVE---APERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQG 66
            |||..:.|   .|:.||...|          :.|||..|....|:.:.:..|:......:|....
 Worm     2 DSKSEEAEPLLKPKNVEDEGL----------ITSLDVDPTQKSRSPTPKPTPIPVLINDTPVASE 56

  Fly    67 ATLVWRDLC----------------------------------VYTNVGG-----SGQRMKRIIN 92
            ...|.::|.                                  |:.|:..     .|.| :.|:.
 Worm    57 IEQVEKELAHSSERFRKPKTLSVTNDTESARIPSQVKTNAKKLVFQNIQAVVLKKKGVR-QEILK 120

  Fly    93 NSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRR-IGPFMHRISGYVYQD 156
            ...|..:||.|..:|||||:|||||::.|..|........|||:||||. |...|.::|.||.||
 Worm   121 KIDGVARPGELTFIMGSSGAGKTTLLNILTGRNLKNIETDGDIMINGRNMISNEMKKLSAYVQQD 185

  Fly   157 DLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGER 221
            |:|:|:|||.|.|.|.|.||....:...|...|:.|||....|.....|::|:..:|. ||.|||
 Worm   186 DVFIGTLTVRETLRFAAKLRSPSALGATELDSIVDELLVMMSLKKCENTKVGTMTEKS-LSRGER 249

  Fly   222 KRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNV 286
            ||||||.|:|.:|.||||||||:||||:.:.|::..|.:|..:|.|::|||||||:.::...:.:
 Worm   250 KRLAFACEILTDPPILFCDEPTSGLDSFMSHQVIKALRQLTIEGKTVICTIHQPSTSVYHMADQL 314

  Fly   287 MLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLA-----TDPGYEQASQRSAQHLC 346
            :||:.|.||:.|..:...:||...||..|:..:..|..:.|::     |:..|   ::|..:.:.
 Worm   315 ILLSQGHVAYAGPAKQVDAFFGRCGYPIPKFVSSPDHFMRVISHKSFETEDDY---NKRIEKIVL 376

  Fly   347 DQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQW 411
            :...:.........|.:......::..|.|..        .|..:|..::.|:|:.|.|:.::..
 Worm   377 EHDIMKKEQSTHSTLSSSRREHPETAPFTFPR--------TWTAQFFFIFQRSSIQLWRERSVLL 433

  Fly   412 LRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSV--LNLFPQGFPLFMR 474
            ::.||.:.|:.:||:.:.| .|..:..:.:.:|  |..:|....|.::.:  :.:|.:.:|:.:|
 Worm   434 VKLIQTLIMSIMIGSTYYG-LEIDKKSLPSFKG--FAFVSVQMMHMLFMMPAMTVFWKDYPVVVR 495

  Fly   475 ETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNV---- 535
            |.::.:||...||.|...|.....::.|:||..|...:|.|     .:.|..:...|::|:    
 Worm   496 EFQANMYSPSAYYLAKTTADSIQYLVFPVIFSGILLGMTSL-----PYSVVIITNYLIINILLSL 555

  Fly   536 ---------ATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWML 591
                     |..|| ..:|....:|:.   .|||    |:..|..|...::|..|....::||..
 Worm   556 NACSVGQSFAAMCG-HLATGMTVLPIV---CVPL----MVFGGFMITYEAIPWYFLPFAWVSWYK 612

  Fly   592 YANEAMTAAQW------SGVQ---NITCFQESADLPCFHTGQDVLDKYSFNESNVYRNLLAMVGL 647
            |..||:|...:      ||.:   ::...:.|.|..| .||.:.:...:|.|::::.:...::.:
 Worm   613 YGFEAITIVYFNHNSTISGCESNSSVATLKMSIDSNC-TTGIEFIKAQAFEETHLWLDYTVILAV 676

  Fly   648 YFGFHLLGYYCL-WRRAR 664
            ...:.:||.... ||..|
 Worm   677 ILFWKILGALLFTWRIRR 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 184/668 (28%)
wht-5NP_502352.1 3a01204 88..695 CDD:273361 182/637 (29%)

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