DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and wht-1

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001348731.1 Gene:wht-1 / 175859 WormBaseID:WBGene00015479 Length:671 Species:Caenorhabditis elegans


Alignment Length:683 Identity:224/683 - (32%)
Similarity:341/683 - (49%) Gaps:70/683 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 STIEVPSLDSTPKLSK-RNSSERSLPLRSYSKWSP-TEQGATLVWRDLCVYTNVGG--------- 82
            ||:.:.||.|...|:: .|..:..|.....:...| ..:|..|.|..|    ||.|         
 Worm     7 STLILDSLFSNMMLAEMMNDDQLELLKHQQTGIQPVVPEGCNLYWSSL----NVTGPETKPTNFV 67

  Fly    83 -------SGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGR 140
                   ..:|:|.|::|.:|..:.|.|:|::||||:||||||:.|..|......|||.|||:||
 Worm    68 DRFRNNMPKRRVKEILHNVSGMAESGKLLAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGR 132

  Fly   141 RIGPF-MHRISGYVYQDDLFLGSLTVLEHLNFMAHLRL-DRRVSKEERRLIIKELLERTGLLSAA 203
            |...: :..:|.:|.|.|:|:|::|..|||.|||.||: |:..|..||:|.::::|.:.||...|
 Worm   133 RANKWKIREMSAFVQQHDMFVGTMTAREHLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCA 197

  Fly   204 QTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTI 268
            .|.||..:..|.||.||:|||:||.|:|..|.||||||||:|||::.|..:|..|..||..|.|:
 Worm   198 DTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTV 262

  Fly   269 LCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPG 333
            :.|||||||.::..||||.|:|.|||.:.|....|:..|...||.||..|||||.||..||....
 Worm   263 IITIHQPSSHVYSLFNNVCLMACGRVIYLGPGDQAVPLFEKCGYPCPAYYNPADHLIRTLAVIDS 327

  Fly   334 YEQASQRSAQHLCDQF----------AVSSAAKQR--------DMLVNLEIHMAQSGNFPFDTEV 380
            ....|.::...:...|          |:.:|.|.|        |.....:....|..|..|.|: 
 Worm   328 DRATSMKTISKIRQGFLSTDLGQSVLAIGNANKLRAASFVTGSDTSEKTKTFFNQDYNASFWTQ- 391

  Fly   381 ESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGT-TEPSQLGVQAVQG 444
              |..:.|         |:.||::|||.:..:|.:|.:..|||.|..|..| ..|:.  :.::.|
 Worm   392 --FLALFW---------RSWLTVIRDPNLLSVRLLQILITAFITGIVFFQTPVTPAT--IISING 443

  Fly   445 ALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIIC 509
            .:|..|....:...:..:.:.....|:.:||..:|:|.|..|:.|..:|.||..||.|:::..|.
 Worm   444 IMFNHIRNMNFMLQFPNVPVITAELPIVLRENANGVYRTSAYFLAKNIAELPQYIILPILYNTIV 508

  Fly   510 YWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMA----YLVPLDYIFMITSGI 570
            ||::||...|:.:...::..:|:.|||.:.....:|.|.:..:||.    ::||:    |...|.
 Worm   509 YWMSGLYPNFWNYCFASLVTILITNVAISISYAVATIFANTDVAMTILPIFVVPI----MAFGGF 569

  Fly   571 FIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNI-TCFQESADL----PCFHTGQDVLDKY 630
            ||..:::|..|.|...||:..|..||:...:|..::.| .||..|...    .|...|..||:..
 Worm   570 FITFDAIPSYFKWLSSLSYFKYGYEALAINEWDSIKVIPECFNSSMTAFALDSCPKNGHQVLESI 634

  Fly   631 SFNESNVYRNLLAMVGLYFGFHLLGYYCLWRRA 663
            .|:.|:...::..:.|::.|..::.|..|..|:
 Worm   635 DFSASHKIFDISILFGMFIGIRIIAYVALLIRS 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 214/643 (33%)
wht-1NP_001348731.1 3a01204 76..667 CDD:273361 207/608 (34%)

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