DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and abch-1

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_495320.1 Gene:abch-1 / 174078 WormBaseID:WBGene00016973 Length:595 Species:Caenorhabditis elegans


Alignment Length:598 Identity:137/598 - (22%)
Similarity:231/598 - (38%) Gaps:91/598 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 RIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDI---------LINGRRIGP 144
            :|:.|.:.....|.:.|::|.:.||||||:..|.  ..||    |||         ::..||...
 Worm    35 QILKNISFTATSGEIHAIVGVADSGKTTLLEALT--SGAG----GDIGGIAMLDKFMLTRRRFNK 93

  Fly   145 FMHRISGYVYQDDLFLGSLTVLEHLNFMAH---------LRLDRRVSKEERRLIIKELLERTGLL 200
            |...|:   |::. :..||:|...|.:.|.         |.:|.|:|:                |
 Worm    94 FCSHIN---YRNQ-YPSSLSVRSLLYYHARLCLSSTHTSLEIDHRISE----------------L 138

  Fly   201 SAAQTRIGSGDDK-KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQK 264
            ||....||...|| :.||...|:|:...:|||.:|::...|:||..|...||.||:..|:..|.|
 Worm   139 SAMFDVIGYAHDKLEDLSFSARRRVMTVMELLKDPILTIIDDPTAYLSPLSAYQLIYALHFYAAK 203

  Fly   265 -GTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVL 328
             ...|:.|:....|.|.....:...|..|.||::|..:...:.|...|:.||...|||.:.:.:|
 Worm   204 FNRIIIITLRNVRSDLSHLLGSATCLFYGEVAYSGQMRLLPNHFKKAGFECPPNENPAAYYLSLL 268

  Fly   329 ATDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEV--ESFRGVAWYKR 391
            ..|   :::.|:..:  ..:.|....|.:.|...:.:|    ||:....|.|  :|.|.......
 Worm   269 TID---KESMQKVME--TQEKATKLVAFRTDNDTSSDI----SGSSATGTGVLLDSGRKNPSIST 324

  Fly   392 FHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYH 456
            ...:..|..|:|:.......|..:....:...:.:....|:.||.|....:...|::::......
 Worm   325 VAAILFRRVLSLIGSTPSNSLAGLIAFPVTAAVLSFLRPTSLPSSLFFWKLLTFLYLLLQTIVIF 389

  Fly   457 PMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYA 521
            |.||..:|      |..||  ..||..........:..|....|:..:||.|..|.....:.|..
 Worm   390 PNYSKTSL------LSFRE--CNLYCQTTSLTIFSIFFLVYSCIQSSLFVGIVLWSFKSEAMFQI 446

  Fly   522 FGVTAMCVVLVMNVATACGCFFSTAFNSVPL----AMAYLVPLDYIFMITSGIFIQVNSLPVAFW 582
            .....:..:...::.|.|..:.....|.|.|    .:|:.|..:.:...|:...||        :
 Worm   447 SLNLFLLSIFSFSIFTICARYLKNCSNIVILQTIIILAFFVSGNGVTGTTTSSSIQ--------Y 503

  Fly   583 WTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFN-ESNVYRNLLAMVG 646
            :...::...|:|..::....|.:.|..|           |....:.|.|.| .|::|....|...
 Worm   504 YIGVINPFNYSNFLLSKLLSSSIDNEEC-----------TFPSYMCKLSMNLHSDLYPPWYAPND 557

  Fly   647 LYFGFHLLGYYCL 659
            ::..|.:|  :||
 Worm   558 VFTNFAIL--FCL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 137/598 (23%)
abch-1NP_495320.1 P-loop containing Nucleoside Triphosphate Hydrolases 18..238 CDD:476819 65/228 (29%)

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