DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and w

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_061509581.1 Gene:w / 1271671 VectorBaseID:AGAMI1_013186 Length:722 Species:Anopheles gambiae


Alignment Length:676 Identity:232/676 - (34%)
Similarity:353/676 - (52%) Gaps:80/676 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WSPTEQGA-----------TLVWRDLCVYTNVGGSG----------------QR-----MKRIIN 92
            |.|...|:           |..|:::.|:......|                ||     .|.::.
Mosquito    53 WKPKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLCTRLRNCCTRQRKDFNPRKHLLK 117

  Fly    93 NSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDIL--INGRRIGPFMHRI-SGYVY 154
            |.||..:.|.|:|:|||||:|||||::.||||.|.|..:..:.:  :||..:.....|. ..||.
Mosquito   118 NVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRARCAYVQ 182

  Fly   155 QDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGG 219
            |||||:.|||..|||.|.|.||:.|.|....::..::|:|:...|:..|.|.||:....|.||||
Mosquito   183 QDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGG 247

  Fly   220 ERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFN 284
            ||||||||.|.|.:|.:|.|||||:||||:.|..::..|..:|.||.||:.|||||||:|:..|:
Mosquito   248 ERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPSSELYCLFD 312

  Fly   285 NVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCDQF 349
            .::|:|:|||||.|||..:..||:..|..||..||||||.:.:||..|..|...:...:.:||.|
Mosquito   313 KILLVAEGRVAFLGSPYQSAEFFSQLGIPCPPNYNPADFYVQMLAIAPAKEAECRDMIKKICDSF 377

  Fly   350 AVSSAAKQRDMLVNLEIHMAQSG-NFPFDTEVESFRGV-------AWYKRFHVVWLRASLTLLRD 406
            |||..|  |::|....:  |..| :.|:  .::...||       :|:.:|:.:..|:.|::|:|
Mosquito   378 AVSPIA--REVLETASV--AGKGMDEPY--MLQQVEGVGSTGYRSSWWTQFYCILWRSWLSVLKD 436

  Fly   407 PTIQWLRFIQKIA--------------------------MAFIIGACFAGTTEPSQLGVQAVQGA 445
            |.:..:|.:|...                          :|.:||:.:.|.. ..|.||..:.|:
Mosquito   437 PMLVKVRLLQTAVGSRGPSSDLPELTTCFPCFFSPRPQMVATLIGSIYFGQV-LDQDGVMNINGS 500

  Fly   446 LFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICY 510
            ||:.::..|:..:::|:|:|....|:|:||.||.||....|:....:|.||..|..|.:|..|.|
Mosquito   501 LFLFLTNMTFQNVFAVINVFSAELPVFLREKRSRLYRVDTYFLGKTIAELPLFIAVPFVFTSITY 565

  Fly   511 WLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVN 575
            .:.|||:....:..|...|.||.||:|:.|...|.|.:|:.:|::...|:...|:|..|.|:...
Mosquito   566 PMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNSA 630

  Fly   576 SLPVAFWWTQFLSWMLYANEAMTAAQWSGVQN--ITCFQESADLPCFHTGQDVLDKYSFNESNVY 638
            |:|..|.:..:|||..|||||:...|||.|.:  |.|.:  |::.|..:|:.:|:.::|...:..
Mosquito   631 SVPAYFKYLSYLSWFRYANEALLINQWSTVVDGEIACTR--ANVTCPRSGEIILETFNFRVEDFA 693

  Fly   639 RNLLAMVGLYFGFHLLGYYCLWRRAR 664
            .::..:..|...|.|....|||.|:|
Mosquito   694 LDIACLFALIVLFRLGALLCLWLRSR 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 229/669 (34%)
wXP_061509581.1 None

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