DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg1

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_033723.1 Gene:Abcg1 / 11307 MGIID:107704 Length:666 Species:Mus musculus


Alignment Length:675 Identity:196/675 - (29%)
Similarity:330/675 - (48%) Gaps:96/675 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IEVPSLDSTPKLSKRNSSE----RSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQR--MKR 89
            :|...|:...|....|.:|    .|||.|:         ...:.::||......|...::  .|.
Mouse    44 VETDLLNGHLKKVDNNFTEAQRFSSLPRRA---------AVNIEFKDLSYSVPEGPWWKKKGYKT 99

  Fly    90 IINNSTGAIQPGTLMALMGSSGSGKTTLMSTLA-FRQPAGTVVQGDILING--RRIGPFMHRISG 151
            ::...:|....|.|:|:||.||:||:|||:.|| :|:   |.::|.:||||  |.:..| .::|.
Mouse   100 LLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRE---TGMKGAVLINGMPRDLRCF-RKVSC 160

  Fly   152 YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVL 216
            |:.|||:.|..|||.|.:...|||:|..:  .|.||.::||:|...|||..|.||.||      |
Mouse   161 YIMQDDMLLPHLTVQEAMMVSAHLKLQEK--DEGRREMVKEILTALGLLPCANTRTGS------L 217

  Fly   217 SGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFD 281
            |||:|||||.|:||:|||.::|.||||:||||.|..|:|:.:..|||.|.:|:|||||||::||:
Mouse   218 SGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFE 282

  Fly   282 NFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSA--QH 344
            .|:.:.:|:.|:..:.|...:.:.:..:.|..||..:|||||::.|.:.:.|.:.:....|  :.
Mouse   283 LFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREG 347

  Fly   345 LCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYK------------------- 390
            :||      |..:||:           |.   ||:|..|   .|::                   
Mouse   348 MCD------ADYKRDL-----------GG---DTDVNPF---LWHRPAEEDSASMEGCHSFSASC 389

  Fly   391 --RFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISEN 453
              :|.:::.|..|:::||..:..||....|.:..:||..:.|....:: .|.:..|.||..:...
Mouse   390 LTQFCILFKRTFLSIMRDSVLTHLRITSHIGIGLLIGLLYLGIGNEAK-KVLSNSGFLFFSMLFL 453

  Fly   454 TYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRST 518
            .:..:...:..||....:|:||..:..||...||.|..:|.:|..|:.|:.:..|.||:|...|.
Mouse   454 MFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSD 518

  Fly   519 FYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI-FMITSGIFIQVNSLPVAFW 582
            ...|.:.|....:...||.:.|.....|..|:.:| .::.|:..| .::.||.|:..:::|....
Mouse   519 AVRFVLFAALGTMTSLVAQSLGLLIGAASTSLQVA-TFVGPVTAIPVLLFSGFFVSFDTIPAYLQ 582

  Fly   583 WTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPC-------FHTGQDVLDKYSFNESNVYRN 640
            |..::|::.|..|.:..:.:.        .:..||.|       |...:.:|.:.....:.:|.:
Mouse   583 WMSYISYVRYGFEGVILSIYG--------LDREDLHCDIAETCHFQKSEAILRELDVENAKLYLD 639

  Fly   641 LLAMVGLYF-GFHLLGYYCLWRRAR 664
            .: ::|::| ...|:.|:.|..:.|
Mouse   640 FI-VLGIFFISLRLIAYFVLRYKIR 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 187/635 (29%)
Abcg1NP_033723.1 3a01204 60..666 CDD:273361 192/659 (29%)

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