DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and abcg4

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_004916110.1 Gene:abcg4 / 101734071 XenbaseID:XB-GENE-22063023 Length:639 Species:Xenopus tropicalis


Alignment Length:634 Identity:191/634 - (30%)
Similarity:312/634 - (49%) Gaps:78/634 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PTEQGATLVWRDLCVYTNVGGSGQR--MKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFR 124
            |......:.::||......|...::  .|.::...:|......|:.:||.||:||:|||:.||..
 Frog    50 PKRSAVDIEFKDLSYSVREGPCWRKRGYKTLLKCLSGMFCSRELIGIMGPSGAGKSTLMNILAGY 114

  Fly   125 QPAGTVVQGDILING--RRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERR 187
            :.:|  :.|.||:||  |.:..| .::|.|:.|||:.|..|||.|.:....:|:|:.::  |.::
 Frog   115 RESG--MTGQILVNGKQRELRTF-RKMSCYIMQDDMLLPHLTVKEAMMVSTNLKLNEKM--EVKK 174

  Fly   188 LIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQ 252
            .::.|:|...|||..:.||      ...||||:|||||.|:||:|||.::|.||||:||||.|..
 Frog   175 KLVNEILTALGLLDCSGTR------TLFLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCF 233

  Fly   253 QLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEA 317
            |:|:.|..|||.|.||:|||||||::||:.||.:.:|:.|:..:.||..|.:.:....|.:||..
 Frog   234 QVVSLLNSLAQGGRTIICTIHQPSAKLFEMFNKLYILSQGQCIYRGSVTHLIPYLKGLGLHCPTY 298

  Fly   318 YNPADFLIGVLATDPG-YEQASQRSAQH-LC-------DQFAVSSAAKQRDMLVNLEIHMAQSGN 373
            :|||||:|.:.:.:.| ......|:.:. ||       .|..:.......|:.|::|.|...:.:
 Frog   299 HNPADFIIELASGEYGDLNPLLFRAVEDGLCPITRDKSQQTKLDQEHCPNDVSVHVESHTFATSS 363

  Fly   374 FPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLG 438
            .               .:|.:::.|..|::|||..:..|||:..:.:..:||..:.      .:|
 Frog   364 L---------------NQFCILFKRTFLSILRDTVLTHLRFMSHLCIGVLIGLLYL------HIG 407

  Fly   439 VQAVQGALFIMISENTYHPMYSVLNL-----------FPQGFPLFMRETRSGLYSTGQYYAANIL 492
            ..|.:      :..||....:|:|.|           ||....:|:||..:..||...||.|..:
 Frog   408 DDASK------VFNNTGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTM 466

  Fly   493 ALLPGMIIEPLIFVIICYWLTGLR---STFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAM 554
            |.:|..|:.|:.:..|.||:|...   |.|..|...|....|   ||.:.|.....|.||:.:| 
 Frog   467 ADVPFQIVCPVAYCSIVYWMTSQPPEVSRFLLFSALATSTAL---VAQSLGLLIGVASNSLQVA- 527

  Fly   555 AYLVPLDYI-FMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQN--ITCFQESAD 616
            .::.|:..| .::.||.|:...::|....|..::|::.|..|.:..|.: |:..  :.|    .:
 Frog   528 TFVGPVTAIPVLLFSGFFVSFKTIPTYLQWCSYISYVRYGFEGVILAIY-GMDRAPLQC----RE 587

  Fly   617 LPC-FHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCLWRRAR 664
            ||| |...|.||.:....::.:|.:.|.:.|.:.|..||.|..|..|.:
 Frog   588 LPCTFQLPQQVLQELDVEDAKLYVDFLVLGGFFLGLRLLAYLVLRYRVK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 190/629 (30%)
abcg4XP_004916110.1 3a01204 40..639 CDD:273361 191/634 (30%)

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