DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and LPAT2

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_567052.1 Gene:LPAT2 / 824934 AraportID:AT3G57650 Length:389 Species:Arabidopsis thaliana


Alignment Length:369 Identity:120/369 - (32%)
Similarity:206/369 - (55%) Gaps:10/369 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRVYIDPQ 76
            :.:.||..|..||:.|.:..:|:||..|...|.:...:..:.:..||.:.:|:||.|::|:.|.:
plant    11 LGLLFFISGLAVNLFQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADNE 75

  Fly    77 DEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMAEFIFL 141
            ...: .||||.|::.||..:||||..|::..:.|.||...|..||..:::||:||..|.:|::||
plant    76 TFNR-MGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFL 139

  Fly   142 DRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKHHLIPRTK 206
            :||:.||:..:|:.|:.:..:|.|.||.|..||||||.||.:.:.::|....||:.::.||||||
plant   140 ERNWAKDESTLKSGLQRLSDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPIPRNVLIPRTK 204

  Fly   207 GFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVVPDDEKEAAA 271
            ||.:::..||...|||||:.:...|.: |.||||....|:|...:::|:...:..:|:.:...|.
plant   205 GFVSAVSNMRSFVPAIYDMTVTIPKTS-PPPTMLRLFKGQPSVVHVHIKCHSMKDLPESDDAIAQ 268

  Fly   272 WMQDFFAEKDKIIDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGWATFAVLCILHYLVTSL 336
            |.:|.|..||.::|......:|   .|.:|  :.|.:| :.:|...|.||....|..:.:|..:.
plant   269 WCRDQFVAKDALLDKHIAADTF---PGQQE--QNIGRP-IKSLAVVLSWACVLTLGAIKFLHWAQ 327

  Fly   337 VAGNWFGFITVLSILGGFYSL-MEYAVNASKISKASAYGAAAAK 379
            :..:|.| ||:.::..|..:| |:..:.:|:..:::......||
plant   328 LFSSWKG-ITISALGLGIITLCMQILIRSSQSERSTPAKVVPAK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 117/354 (33%)
LPAT2NP_567052.1 PLN02380 1..375 CDD:178006 120/369 (33%)

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