DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Agpat5

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001386354.1 Gene:Agpat5 / 306582 RGDID:1306405 Length:365 Species:Rattus norvegicus


Alignment Length:315 Identity:78/315 - (24%)
Similarity:152/315 - (48%) Gaps:27/315 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 YCI----LVCVAEWYAGSKLRVYID-PQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLG 113
            ||:    ::...|.|.|.::.:|.| |::      ||:.:.|.||...:||:.|.|:..:...||
  Rat    55 YCVYQNMVLFFFENYTGVQILLYGDLPKN------KENVIYLANHQSTVDWIVADMLAARQDALG 113

  Fly   114 GTKAYAKKMLRYVPVLGWVWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFT 178
            ..:...|..|:::|:.|:.:.....|::.|:.:.:...::::|:...:...|::|::..||||:.
  Rat   114 HVRYVLKDGLKWLPLYGFYFAQHGGIYVKRSAKFNDKEMRSKLQSYVNAGTPMYLVIFPEGTRYN 178

  Fly   179 PAKHEL---SVKFAEERGLPLLKHHLIPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPK---- 236
            ....:|   |..||.:|||.:|||.|.||.|....:..:|:....||||:.:.::.|.:..    
  Rat   179 ATYTKLLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDSMKSHLDAIYDVTVVYEGNEKNSGKYS 243

  Fly   237 --PTMLSQLNGEPVEPYMYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKIIDSFHETGSFFKNSGV 299
              |:|...|..:....:::..|:....||::::....|:.:.|..|||::..|:::....:.:  
  Rat   244 NPPSMTEFLCKQCPRLHIHFDRIDRKEVPEEQEHMKKWLHERFEIKDKLLVEFYDSPDPERRN-- 306

  Fly   300 KEVPEKIYKPRLS---TLLNFLGWATFAVLCILHYLVTSLVAGNWFGFITVLSIL 351
             :.|.|....|||   ||.:.|...:.....::......|..|.|. :.|:|..|
  Rat   307 -KFPGKRVHSRLSVNKTLPSVLILGSLTAAMLMTESGRKLYMGTWL-YGTLLGCL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 78/315 (25%)
Agpat5NP_001386354.1 LPLAT_LCLAT1-like 63..264 CDD:153252 53/206 (26%)
Acyltransf_C 258..319 CDD:465006 13/63 (21%)

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