DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat4 and Lclat1

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_036016461.1 Gene:Lclat1 / 225010 MGIID:2684937 Length:492 Species:Mus musculus


Alignment Length:374 Identity:96/374 - (25%)
Similarity:172/374 - (45%) Gaps:36/374 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYY------LHYSFYCILVCVAEWYAGSKL 69
            |.|.:||  |....:|.:|.::.:         :|::|      |..::..:.|.:.|...|.::
Mouse   129 LFAGSFF--GSIFMLGPILPLMFI---------NLSWYRWISSRLVATWLTLPVALLETMFGVRV 182

  Fly    70 RVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWW 134
            .:..|     .|...|..:::|||...:||:..|....:...|...|...|..|:.||..||...
Mouse   183 VITGD-----AFVPGERSVIIMNHRTRVDWMFLWNCLMRYSYLRVEKICLKSSLKSVPGFGWAMQ 242

  Fly   135 MAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKH 199
            :|.|||:.|.::.||...:..:....:..:|:.||:..|||..|......|..|||:.||...::
Mouse   243 VAAFIFIHRKWKDDKSHFEDMIDYFCAIHEPLQLLIFPEGTDLTENNKARSNDFAEKNGLQKYEY 307

  Fly   200 HLIPRTKGFTTSLPTMR--GICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVV 262
            .|.|||.|||..:..:|  ....|::||.:|:..|. |:......|...|.|.:.:::|.|.|.:
Mouse   308 VLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPYNI-PQTEKHLLLGDFPKEIHFHVQRYPADSL 371

  Fly   263 PDDEKEAAAWMQDFFAEKDKIIDSFHETGSFFKNSGVKEVP--EKIYKPRLSTLLNFLGWATF-A 324
            |..:::...|....:.||::.:.||::....|..:|...||  :...:..:..||:.:.||.| :
Mouse   372 PTSKEDLQLWCHRRWEEKEERLRSFYQGEKNFHFTGQSTVPPCKSELRVLVVKLLSIVYWALFCS 436

  Fly   325 VLCILHYLVTSLVAGNWFGFITVLSILGGFYSLMEYAVNASKISKASAY 373
            .:|:|.||.:.:   .|:..|:::     |:.|.|......:|.:.:.|
Mouse   437 AMCLLIYLYSPV---RWYFIISIV-----FFVLQERIFGGLEIIELACY 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 93/364 (26%)
Lclat1XP_036016461.1 LPLAT_LCLAT1-like 171..364 CDD:153252 57/198 (29%)
Acyltransf_C 349..423 CDD:465006 16/73 (22%)

Return to query results.
Submit another query.