DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat4 and lclat1

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001135517.1 Gene:lclat1 / 100216057 XenbaseID:XB-GENE-5993059 Length:371 Species:Xenopus tropicalis


Alignment Length:27 Identity:9/27 - (33%)
Similarity:14/27 - (51%) Gaps:3/27 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GAAGEALKADLLNHPEYIE---QNATL 211
            |...|.|:..:||..|..:   :|||:
 Frog     8 GLLDELLQTRVLNQEEMEKVKRENATV 34

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 9/27 (33%)
lclat1NP_001135517.1 LPLAT_LCLAT1-like 55..247 CDD:153252
Acyltransf_C 233..307 CDD:465006
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.