DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13041 and CG34268

DIOPT Version :10

Sequence 1:NP_648872.1 Gene:CG13041 / 39801 FlyBaseID:FBgn0036605 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001097465.1 Gene:CG34268 / 5740141 FlyBaseID:FBgn0085297 Length:83 Species:Drosophila melanogaster


Alignment Length:128 Identity:42/128 - (32%)
Similarity:52/128 - (40%) Gaps:53/128 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVAVIALLVATASA--GLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVHSKAVVQPV- 62
            ||:.:|||..|||.|.|  |.||.                                |..|| || 
  Fly     1 MFRIIAVIFALVAMAFAAPGYIEP--------------------------------SYGVV-PVA 32

  Fly    63 -VAPIVKTTTYSHPAVAVHAAPVVHSVPVVHAAPVVHSVPLVHSAPLVKSVVHSAPLAYTLHH 124
             |.|:||            :.|||..||||...|||.:||:|...|::||  ::.| .|. ||
  Fly    33 QVVPVVK------------SVPVVKHVPVVQHVPVVKNVPVVQHVPVLKS--YAVP-TYG-HH 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13041NP_648872.1 Retinin_C 25..>73 CDD:427994 9/49 (18%)
CG34268NP_001097465.1 None

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