DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13041 and retinin

DIOPT Version :8

Sequence 1:NP_648872.1 Gene:CG13041 / 39801 FlyBaseID:FBgn0036605 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_524995.2 Gene:retinin / 53564 FlyBaseID:FBgn0040074 Length:191 Species:Drosophila melanogaster

Alignment Length:67 Identity:32/68 (47%)
Similarity:42/68 (62%) Gaps:2/68 (3%)


  Fly     5 VAVIALLVATASAGLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVHS-KAVVQPVVAPIVK 68
            |:|...|:..|..|| .|...:.||.:||||.||...|:|||||:.|.||. :.:|.|:|||.|:
  Fly   102 VSVPLPLILAARNGL-RTVLTIQEPAVAKVGEVVQHVPTAVSHQTQTVVHDHRRLVTPIVAPAVR 165

  Fly    69 TT 70
            ||
  Fly   166 TT 167

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG13041NP_648872.1 Retinin_C 25..>73 CDD:282395 25/48 (52%)
retininNP_524995.2 Retinin_C 122..>169 CDD:309599 25/47 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR34931
RoundUp 00.000 Not matched by this tool.
11.100

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