DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13062 and CG13063

DIOPT Version :8

Sequence 1:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_648869.1 Gene:CG13063 / 39797 FlyBaseID:FBgn0036601 Length:129 Species:Drosophila melanogaster

Alignment Length:124 Identity:38/125 (30%)
Similarity:51/125 (41%) Gaps:49/125 (39%)


  Fly     1 MMKLVVSLLSICALTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPAA-------------- 51
            |.|||| |.::.|:..||||                 |.:..||.|..|||              
  Fly     1 MFKLVV-LSALLAVAVARPG-----------------HLYESPLVYAAPAATTVVQERSLAKVGS 47

  Fly    52 --------VSHQSSTVVHSVPH-HIIKPVLLPTVVKTVV------HPPIIKAYHPAPII 95
                    |||||.:||||  | |:::.::.|.|..|.|      .|.:..||..||::
  Fly    48 VVSSIPTSVSHQSQSVVHS--HSHVVEDIVAPVVKSTPVVSYAAAAPVVHTAYAAAPVV 104

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG13062NP_648871.3 Retinin_C 32..95 CDD:282395 27/92 (29%)
CG13063NP_648869.1 rne <11..124 CDD:236766 32/114 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR34931
RoundUp 00.000 Not matched by this tool.
11.100

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