DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13062 and CG13063

DIOPT Version :10

Sequence 1:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_648869.1 Gene:CG13063 / 39797 FlyBaseID:FBgn0036601 Length:129 Species:Drosophila melanogaster


Alignment Length:124 Identity:38/124 - (30%)
Similarity:51/124 - (41%) Gaps:49/124 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMKLVVSLLSICALTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPAA-------------- 51
            |.|||| |.::.|:..||||                 |.:..||.|..|||              
  Fly     1 MFKLVV-LSALLAVAVARPG-----------------HLYESPLVYAAPAATTVVQERSLAKVGS 47

  Fly    52 --------VSHQSSTVVHSVPH-HIIKPVLLPTVVKTVV------HPPIIKAYHPAPII 95
                    |||||.:||||  | |:::.::.|.|..|.|      .|.:..||..||::
  Fly    48 VVSSIPTSVSHQSQSVVHS--HSHVVEDIVAPVVKSTPVVSYAAAAPVVHTAYAAAPVV 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13062NP_648871.3 Retinin_C 40..95 CDD:427994 26/83 (31%)
CG13063NP_648869.1 rne <11..124 CDD:236766 32/113 (28%)

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