DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13062 and CG13043

DIOPT Version :8

Sequence 1:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_648868.2 Gene:CG13043 / 39796 FlyBaseID:FBgn0036600 Length:148 Species:Drosophila melanogaster

Alignment Length:135 Identity:41/136 (30%)
Similarity:54/136 (40%) Gaps:59/136 (43%)


  Fly     1 MMKLVVSLLSICALTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPA--------------- 50
            |.|||| |.::.|:.|||||                |.....||.|..||               
  Fly     1 MFKLVV-LSALLAVAAARPG----------------HLLESSPLVYAAPAATTIVQEPVLAKVGA 48

  Fly    51 -------AVSHQSSTVVHSVPH-HIIKPVLLPTVVKT----------VVH-----PPIIKAYH-- 90
                   ||||||.:||||  | |:::.|:.|.|..|          |||     .|::...:  
  Fly    49 VVKSVPTAVSHQSQSVVHS--HAHVVEDVVAPVVKSTPVVSYAAAAPVVHTSYAAAPVVHTSYAA 111

  Fly    91 PAPII 95
            |||::
  Fly   112 PAPVV 116

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG13062NP_648871.3 Retinin_C 32..95 CDD:282395 29/103 (28%)
CG13043NP_648868.2 Retinin_C 37..105 CDD:282395 20/70 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR34931
RoundUp 00.000 Not matched by this tool.
11.100

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