DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13062 and CG4982

DIOPT Version :8

Sequence 1:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster

Alignment Length:115 Identity:45/116 (39%)
Similarity:54/116 (47%) Gaps:28/116 (24%)


  Fly     1 MMKLVVSLLSICA-LTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPAAVSHQSSTVVHSVP 64
            |.|:|..|..:.| |..|||.:|..:.|    :.|.|.....|  .|.||||||||||||||.. 
  Fly     1 MFKVVFLLCGVFAVLIQARPSYLPSYEH----VEYAPSVVGYE--SYALPAAVSHQSSTVVHEK- 58

  Fly    65 HHIIKPVLLPTVVKTVVHPPIIK-AYHPAPIIKAYHP----------YDP 103
                :|...|    .|.|.||:| ||.||..| :|.|          |:|
  Fly    59 ----RPYWRP----IVDHTPILKAAYAPATSI-SYAPLGYAGNSAGWYEP 99

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG13062NP_648871.3 Retinin_C 32..95 CDD:282395 29/64 (45%)
CG4982NP_648866.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR34931
RoundUp 00.000 Not matched by this tool.
11.100

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