DRSC/TRiP Functional Genomics Resources

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Protein Alignment elg1 and rfc1

DIOPT Version :10

Sequence 1:NP_996103.1 Gene:elg1 / 39770 FlyBaseID:FBgn0036574 Length:1162 Species:Drosophila melanogaster
Sequence 2:XP_073800067.1 Gene:rfc1 / 100037336 ZFINID:ZDB-GENE-070410-99 Length:1148 Species:Danio rerio


Alignment Length:1199 Identity:252/1199 - (21%)
Similarity:423/1199 - (35%) Gaps:323/1199 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KQKHREKHK-----RKREEKRRAALMEDQ----------KSTTEEVKANAKEKPQP--------- 105
            |||.|.|.|     .|...||:..::.|.          |.:|:|......||..|         
Zfish    33 KQKSRPKVKSSTSDEKPSGKRKKRVIVDSDSEEEKKVKTKKSTKETSTIPTEKKHPVTYVSDSDS 97

  Fly   106 ------LREKSSQENGLKNGRRRSSPLK--------SSTPVADNQSIMKHFAKAGKPENVGVSP- 155
                  |::...:|||...|::.|...|        |.:|| .:.|.:|...|:.:|.   :|| 
Zfish    98 DGTFETLKKPKPKENGTAKGKKESDSGKAKQVKVSSSKSPV-KSPSTVKGGVKSSQPT---ISPK 158

  Fly   156 VSTAKPKP-TTNVFEFMMNARNRSLGVNEGGAESPADQEIGSEAATPTTKRKLLLQEWNERKGGA 219
            |:...||. .|:|..|.             |:.|....| ....|:.:||||..|:        .
Zfish   159 VAPTPPKQMPTSVMAFF-------------GSSSVQRSE-KKMVASSSTKRKAPLE--------T 201

  Fly   220 KRRLADEARGEFIELQMEQRAKRLRKMLTKTD--AKEVTAPSSAPTDPTVKRLRGRPRSRRISSM 282
            ...|:|||..:  ||||:: .|.|.|.:...:  |:.:.....||.          |:..|:.|:
Zfish   202 DESLSDEAIAK--ELQMDE-DKELEKQIHDDEEFARTLAMLDDAPL----------PKKARVDSI 253

  Fly   283 D---AQNQIVES--KPPVVKAKDQDPGTEEL-----LSKLSSPTKKRDSLLGYFPKVESPKELAE 337
            .   :.:|.:.|  ||    .||..|.|..:     |:::....::||.        :..|:..|
Zfish   254 SPSKSSSQAIASDIKP----KKDLSPKTSPVKTSSKLAQMKRRQEERDE--------QGKKDKGE 306

  Fly   338 KVI-IAIETPPME-TPKRRTLRRKSQQETPIVAESTPSSRPRRSCVGKARYDYDLETSPGKQQKA 400
            |.| |:.:..|:. |...|....|:...:..:|:|...|.|:...|..       :|||.|.:..
Zfish   307 KQIKISPKKEPISPTSSERAATPKTASASAGMAKSRNLSTPKSESVAS-------KTSPTKPENT 364

  Fly   401 KP-----QKADESVEIIDLDNSNPAATPKKLAPLFVRQLPKPSPDPSVLKARQAFLQSGVPDKIR 460
            .|     ::|:.|.....|:...|.|...|         ..|..:.:.|:. ..|:.:||.:.:.
Zfish   365 SPDDLEKKRANSSAYRSYLNREGPRALGSK---------DIPQGEENCLEG-CVFVLTGVLESME 419

  Fly   461 QEQIRQKNFDQMY----------EDSYEVFPRLAHIG----CESFGSKNGPLDIPFALRAEEEYS 511
            :::  .|:..:.|          :.:|.|..|.:.:.    .||||:|         :..|:|..
Zfish   420 RDE--AKSLIERYGGKVTGNVSRKTTYLVLGRDSGVSKTEKAESFGTK---------IINEDELL 473

  Fly   512 EVTKALPANKRRAKASSITSCLPADFTSSKTLNKFNYATLPQLENKRGFVKLWKNDFDRFPTFKC 576
            ::.:..|..|.:.:.::     .|:..||||          :..:.||  |:..:.....|....
Zfish   474 DLIRTKPGKKSKYEIAA-----EAENKSSKT----------RTPDSRG--KVASSAKKATPQGPS 521

  Fly   577 YNQMREKYRHFSAIDSAQDTQQMGESLVVTRRTRRSMEQNMAQNEEEAKP-PPSAPNGE---LLF 637
            .|: |......|...||..:...|.|....::: .|.:|.     :.|.| ..|||..:   ||:
Zfish   522 PNK-RSSSGGKSKPGSASKSGARGASCSEVKKS-LSFDQT-----KTASPVSHSAPENDGSSLLW 579

  Fly   638 TEKYKPLLFEQVLVNLTPVQ-------ELREFLSSW----SGNGGSNRNSQGMDDTFDMSNDSAS 691
            .:||:|    :.|.||...|       :|..:|.||    |||..:.....|   .|...:|   
Zfish   580 VDKYRP----RSLKNLIGQQGDQSCANKLLRWLQSWHKHHSGNAKAPAPKFG---KFGSKDD--- 634

  Fly   692 MGSSSNTMVLVGPSSSGKTNAVFTLANDMNFNVLEINAGMKRTGKKLIQELQEATQSHQIRKDGK 756
             ||.....:|.||...|||.....:..::.::.:|:||...|:...|.:.:.|:..:..|:   .
Zfish   635 -GSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIK---N 695

  Fly   757 AGGGSSQQLLQKLQKSGLKAKAAAVEPPSEVRKSLILIEDADILFDNLDAGFTDAIYTLAASSKR 821
            ...|:||.:..                     |.::::::.|.:..|.|.|....:..|...||.
Zfish   696 FYTGASQTVSS---------------------KHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKI 739

  Fly   822 PVIVVATDPNCAHLQRLMQQNI-IHFQAPNALNISRFLAVLSLMENCPIELDELISVYLYNQQNL 885
            |:|.:..|.|...::.|..... :.||.|....|...:..::..|...|....|..|.|.:.|::
Zfish   740 PIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILASNQDI 804

  Fly   886 RKTLMELQFYIQSGGDSTRDRTGGGIKSPTK-----------------TSNSRLATVDGSRIHQR 933
            |:.|..|..:.......|.|:......:..|                 ...:.::.:|.|.:   
Zfish   805 RQVLHNLSMWSAKDKVMTYDQAKADANNAKKDMKLGPFDVCRKVFALGEETAHMSLIDKSDL--- 866

  Fly   934 FFEFFTSPQNVQYRIPFPVDFSLLRLNLPDLMASSAMLKEQQAAGGGSRTAAKRKSRSPKKAWLS 998
            ||.                |:|     |..|......|..:.||.||:.                
Zfish   867 FFH----------------DYS-----LAPLFVQENYLHVRPAAAGGNL---------------- 894

  Fly   999 SATGQKSDGHSSSLATLASFYDNISVASLMDSDCSDRLQWHLSEEIGHLLVEQALQTGLATKE-- 1061
                      .|.|..|:...|:|....|:|.....:..|       .||..||:...:...|  
Zfish   895 ----------KSHLVLLSKTADSICDGDLVDRQIRSKQTW-------SLLPTQAIYASVLPGELM 942

  Fly  1062 ----CPYNLFDKPVQRFS-----------ICQHLGNGVLRSDSAKSLDFEPALRSICRSEKERAG 1111
                ..:..|...:.:||           :..|:....|.|..|.:||:.|.|||......:..|
Zfish   943 RGYMSQFPNFPSWLGKFSSSGKHSRIIQELASHMSLKTLSSKEAVNLDYLPYLRSAVLKPLQSLG 1007

  Fly  1112 LERKSSRF-----YHYLRNHTVNVTSFTT 1135
            .|..:...     |..::....|:...:|
Zfish  1008 SEGANQSVKLMDDYDIIKEDVDNMMEIST 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elg1NP_996103.1 PRK04195 638..>830 CDD:235250 45/202 (22%)
rfc1XP_073800067.1 None

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