DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs20 and Trappc2

DIOPT Version :10

Sequence 1:NP_648841.1 Gene:Trs20 / 39769 FlyBaseID:FBgn0266724 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_079708.2 Gene:Trappc2 / 66226 MGIID:1913476 Length:140 Species:Mus musculus


Alignment Length:137 Identity:79/137 - (57%)
Similarity:108/137 - (78%) Gaps:0/137 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRFN 67
            ::||||||.:|||::|.||....|...|:|||||.|||||||||||||:.|.:.||.||::|:||
Mouse     4 SFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFN 68

  Fly    68 QWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSPMFEKKSEIF 132
            :||||||:||..:|||::||.:.::||||||.::||.|||.:||.||..|:||:|..|::|.:..
Mouse    69 EWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRSSAFDRKVQFL 133

  Fly   133 GRKYLLS 139
            |:|:|||
Mouse   134 GKKHLLS 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs20NP_648841.1 TRAPPC2_sedlin 3..137 CDD:341429 76/133 (57%)
Trappc2NP_079708.2 TRAPPC2_sedlin 4..138 CDD:341429 76/133 (57%)

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