DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbetaL and kdm6ba

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_005172296.1 Gene:kdm6ba / 556678 ZFINID:ZDB-GENE-091005-1 Length:1996 Species:Danio rerio


Alignment Length:568 Identity:108/568 - (19%)
Similarity:180/568 - (31%) Gaps:184/568 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KKLESKGRKGV---IHAVIGPVIDVYFEEEVPEVL-----NALQVQDAPIANLVLEVFHHLGNNI 151
            |::.|.|.:|:   ..:..|......||||..|:|     |.:::.|..|..             
Zfish   913 KQIPSAGLQGLGSNASSCSGDSDGAQFEEETSELLPDGLANIMKMLDESIKK------------- 964

  Fly   152 VRCVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVL---GRILNVVGDPIDDRGEVKSDFYSFIHNE 213
                ..:...|.:..|.|.:..:...||..|:.|   ..:..:...|.:       |:....|..
Zfish   965 ----EEELYSGQKGEQAVSELQFSTNVAPVKSYLCAPDLVPALKQSPAE-------DYQPDGHAS 1018

  Fly   214 APEL-------------TDLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELIN 265
            .|.|             :.|..:.|:|.:.:|||...|.                         :
Zfish  1019 PPVLSRQGSLASPCSRTSSLEEEEEVLASSLKVIPKSAN-------------------------S 1058

  Fly   266 NIAKSHGGYSVFVGAGERTREGNDLY--HEMIESKVISLEDDSSKVVLVFGQMNEPPGA----RS 324
            |...|..|.....|...|..:...||  .|:::|:   .|||..:|    .:.:|.|..    |.
Zfish  1059 NSVLSQDGSLATTGTNYRHSDLAKLYGISEVVKSE---CEDDEDEV----DREDETPSCSPPQRP 1116

  Fly   325 RVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSA----VGYQP--TLGTDM 383
            .:..||  :...|::      |..:....::|..|..    .||.|.:    |.|..  :||.|:
Zfish  1117 HLHQTG--VNSMFKN------LASVLESQKYTYRGGP----FGRPPRSAFVGVKYSSSLSLGPDI 1169

  Fly   384 GTMQERITSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSS 448
             ..|::.||..:||.:.        ...|.|...:..|:...|..||....|       ......
Zfish  1170 -CRQQQSTSPTSGSASH--------PGFSSPTQTSAISNSGQTCPLSPTSCE-------SESKRG 1218

  Fly   449 SRILDPDVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDE--LSEEDKLTVARARKMQRFLSQP 511
            .:|...|::|.:                           ||  :|||.|:.|...........:|
Zfish  1219 DKISPSDLLGND---------------------------DEKDISEEPKVKVDSGNMKDLLERRP 1256

  Fly   512 --FQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAEEVLAKATQLAASMSGD 574
              ..::|......|:.:.|.|.:..||                     :...|:|.::.      
Zfish  1257 KLTTISESSLAELGQSLEVNKHIIPFK---------------------DHSKAEAREIC------ 1294

  Fly   575 APPAKAEAKKDEKKDTKPEEGKKEEPPKGEDKKEEAKDDKPKEPEKKD 622
            .|..:.|..:|.:::.|.:.....:  |.|||||.    |.|..|:.|
Zfish  1295 KPVEEKERHRDRERERKHKHSSSSK--KHEDKKER----KKKHRERHD 1336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 91/506 (18%)
kdm6baXP_005172296.1 Atrophin-1 273..>657 CDD:460830
JmjC 1696..1760 CDD:214721
JmjC 1730..1838 CDD:396791
Blue background indicates that the domain is not in the aligned region.

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