DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbetaL and JARID2

DIOPT Version :10

Sequence 1:NP_648836.2 Gene:ATPsynbetaL / 39761 FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_011512881.1 Gene:JARID2 / 3720 HGNCID:6196 Length:1309 Species:Homo sapiens


Alignment Length:400 Identity:91/400 - (22%)
Similarity:147/400 - (36%) Gaps:101/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 HGGYSVFVGAGERTREGNDLY-HEMIES----------KVISLEDDSSKVVLVFGQMNEPPGARS 324
            |.|: ||.|:...|||...:. |:..|:          :..|..:.:|        .|.|..|.|
Human   283 HNGH-VFNGSSRSTREKEPVQKHKSKEATPAKEKHSDHRADSRREQAS--------ANHPAAAPS 338

  Fly   325 R-VVLTGLTIAEYFRDV--DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTM 386
            . ....||....:...:  ..||:...:..:...|:    :|:|...:.||...:....:...|:
Human   339 TGSSAKGLAATHHHPPLHRSAQDLRKQVSKVNGVTR----MSSLGAGVTSAKKMREVRPSPSKTV 399

  Fly   387 QERITSTRNGSITSVQAVYVPADDL--SDPAPAATFSHL--------DATT---VLSRPIAELGI 438
            :...|.|: |::|..:|......|.  :...|::..:|.        :|.|   |||...|....
Human   400 KYTATVTK-GAVTYTKAKRELVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKST 463

  Fly   439 YPAVDPLDSSSRILDP-----DVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTV 498
            .|||:.|..|.| |:|     :|.|       |.:::.||..:.|::             .|..:
Human   464 GPAVNGLKVSGR-LNPKSCTKEVGG-------RQLREGLQLREGLRN-------------SKRRL 507

  Fly   499 ARARKMQRFLSQPFQV------AEIFTGHPGKLVPVEKCVEGFKRLLNGEY-DDIPEIAFYMVGD 556
            ..|.:.::..|.|.::      ||    .|||..|.|      :.||||.. .::||.:.     
Human   508 EEAHQAEKPQSPPKKMKGAAGPAE----GPGKKAPAE------RGLLNGHVKKEVPERSL----- 557

  Fly   557 AEEVLAKATQLAASMSGDAPPAKAEAKKDEKKDT-------KPEEGKKEEPPKGEDKKE-EAKDD 613
             |....|......|..|.....||::...|.:.|       ||::..|.|  ||..|.. .|.|:
Human   558 -ERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSGKAE--KGGGKAGWAAMDE 619

  Fly   614 KP-KEPEKKD 622
            .| ..|..|:
Human   620 IPVLRPSAKE 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 AtpD 103..570 CDD:439825 73/337 (22%)
JARID2XP_011512881.1 JmjN 619..660 CDD:128818 3/10 (30%)
ARID_JARD2 683..794 CDD:350634
JmjC 979..1094 CDD:396791
zf-C5HC2 1202..1255 CDD:460750
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.