Protein Alignment ATPsynbetaL and Kdm5a

DIOPT Version :10

• Sequence 1: NP_648836.2
• Gene: ATPsynbetaL / 39761
• FlyBaseID: FBgn0036568
• Length: 622
• Species: Drosophila melanogaster
• Sequence 2: NP_001264106.1
• Gene: Kdm5a / 312678
• RGDID: 1305429
• Length: 1690
• Species: Rattus norvegicus
• Alignment Length: 302
• Identity: 66/302 - (21%)
• Similarity: 103/302 - (34%)
• Gaps: 85/302 - (28%)

  Fly   357 QAGSE-----VSALLGRIPSAVGYQPTLGTDMGTMQERITSTRNGSITSVQAVYVPADDLSDPAP 416
            ||..|     :||.|.:..:    .|.|...:.:.|:   |..|..::||.:           :|
  Rat  1286 QAAREKTEKIISAELQKAAA----NPDLQGHLPSFQQ---SAFNRVVSSVSS-----------SP 1332

  Fly   417 AATFSHLDATTVLSRPIAELGIYPAVDPLD-SSSRILDPDVVGEEHYNVARAVQKT--------- 471
            .....:.|..|.....|.|...|...|... .||..|:|::..:|...:......|
  Rat  1333 HQAMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIPIKSEEVVTHMWTAPSFC 1397

  Fly   472 -LQAYKSLQDIIAILGMDELSEEDKLTVARARKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGF 535
             ..||.|     |.....:.|...:....::..:.|.|..|  |.|:   .||....:|:.:
  Rat  1398 AEHAYSS-----ASKSCSQGSSTPRKQPRKSPLVPRSLEPP--VLEL---SPGAKAQLEELM--- 1449

  Fly   536 KRLLNGEYDDIPEIAFYMVGDAEEVLAKATQ-LAASMSGDAPPAK---AEAKKDEKKDTKP---- 592
                             ||||..||....|| :...:....||::   ....:|:..:.||
  Rat  1450 -----------------MVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSVEEKPLKMK 1497

  Fly   593 -----EEGKKEEPPK-----GEDK---KEEAKDDKPKEPEKK 621
                 |:.:|.:..|     ||.|   ||..|.||||:.:.|
  Rat  1498 GKDSSEKKRKRKLEKVEQFFGEGKQKTKELKKIDKPKKKKLK 1539

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATPsynbetaL	NP_648836.2	AtpD	103..570	CDD:439825	47/229 (21%)
Kdm5a	NP_001264106.1	JmjN	18..59	CDD:128818
		ARID_KDM5A	84..175	CDD:350637
		PHD1_KDM5A	295..343	CDD:277075
		JmjC	470..586	CDD:396791
		zf-C5HC2	676..728	CDD:460750
		PLU-1	741..1072	CDD:462475
		PHD2_KDM5A	1163..1215	CDD:277079
		PHD3_KDM5A	1608..1659	CDD:277156