DRSC/TRiP Functional Genomics Resources

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Protein Alignment: ATPsynbetaL and Kdm6b

Sequence 1:NP_648836.2 Gene:ATPsynbetaL FlyBaseID:FBgn0036568 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001017426.1 Gene:Kdm6b MGIID:2448492 Length:1641 Species:Mus musculus

Alignment Length:180 Identity:38/181 (21%)
Similarity:58/181 (32%) Gaps:57/181 (31%)


  Fly     3 VSWAKMATACARIGLKMGPGTG--------GYRGNYLGNPVVFPRYLHASLSLWD--------DK 51
            |.|.:....|..|...:||.|.        .|..|.:.|.......:|.|   |:        |.
Mouse  1467 VHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVS---WNVARTVKISDP 1528

  Fly    52 DKKKSGDECEPEPQEVCKTDAELV----KK-------KDEAEDECEE----------KKSDGGGK 95
            |..|....|..:..:.|:...|.:    ||       |||....|.|          ..|:.|.:
Mouse  1529 DLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSR 1593

  Fly    96 -----------KLESKGRKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDA 134
                       :..|.|.:||:      |::.|..||:.:..:|..:..|
Mouse  1594 NTYLVHCEGCARRRSAGLQGVV------VLEQYRTEELAQAYDAFTLAPA 1637

Known Domains:


GeneSequenceDomainRegion External IDIdentity
ATPsynbetaLNP_648836.2 PRK09280 103..568 CDD:236447 8/33 (24%)
ATP-synt_ab_N 106..173 CDD:280947 6/30 (20%)
F1-ATPase_beta 175..454 CDD:238553
ATP-synt_ab_C 462..571 CDD:278722
Kdm6bNP_001017426.1 TPR repeat 106..136 CDD:276809
JmjC 1341..1405 CDD:214721
JmjC 1375..1483 CDD:202224 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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