DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolD1 and Rev3l

DIOPT Version :10

Sequence 1:NP_524099.2 Gene:PolD1 / 39746 FlyBaseID:FBgn0263600 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_006512685.1 Gene:Rev3l / 19714 MGIID:1337131 Length:3123 Species:Mus musculus


Alignment Length:95 Identity:20/95 - (21%)
Similarity:34/95 - (35%) Gaps:19/95 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSKGLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSC------RLRWLNYLKPSIK 62
            |.|..|:.|.:.:..:       ||.:.:......:|.|....:|.      ..:|     |...
Mouse   242 SGKAPRRRAVSMDNSN-------KYTKSRGRAAKKKAALQAAPESADDSPSQLSKW-----PGSP 294

  Fly    63 RGKFSSDEVDLLLRLHKLLGNRWSLIAGRL 92
            ..: ||||:|..........:..|.::|||
Mouse   295 TSR-SSDELDAWTDFRSRTNSNASTVSGRL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolD1NP_524099.2 PTZ00166 48..1092 CDD:240301 12/51 (24%)
Rev3lXP_006512685.1 PTZ00166 6..>195 CDD:240301
DUF4683 753..1133 CDD:464832
REV3L_RBD 1871..1893 CDD:412083
DNA_polB_zeta_exo 2287..2525 CDD:99821
POLBc_zeta 2551..2999 CDD:99917
zf-C4pol 3035..3102 CDD:464119
Blue background indicates that the domain is not in the aligned region.

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