DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C3 and AT2G20050

DIOPT Version :9

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_179595.5 Gene:AT2G20050 / 816524 AraportID:AT2G20050 Length:1094 Species:Arabidopsis thaliana


Alignment Length:422 Identity:120/422 - (28%)
Similarity:204/422 - (48%) Gaps:38/422 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 SSSTATTTTTSSADHDNDVDEEDEEDDENEGE--------GNGRDADDA-----------THDSS 234
            |.:.::.||..:.::||.....:...:::||.        |..:|:...           |.::.
plant   673 SQNVSSLTTGITNEYDNLEIGTEVSIEKHEGSYFGEWALLGELKDSLSVVAVGEVVCVVLTKENF 737

  Fly   235 ESIE------EDDGNETDDEEDDDESEESSSVQTAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRD 293
            ||..      .|||.:| .....:.|:||:.|.....:.|..|.|.:....:.|.....:.|...
plant   738 ESAVGPLTNISDDGPKT-RHSSFELSKESAKVTDTTALAKATLADLEWTTCLSTTDCSEIGLVHL 801

  Fly   294 RISEKYCAMKILAMTEVIRLKQIEHVKNERNILREIRHPFVISLE--WSTKDDSNLYMIFDYVCG 356
            :..|...::|..:..:|.:|.:...|..|||:::.:..|..|..|  .:..|.:...::.:....
plant   802 KDKENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKPSAIVPEILCTCVDQTFAAILLNTTLA 866

  Fly   357 GELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKK 421
            ..:.:.|.:  .....:..|....:|||:|.:|..:|::|...||.|::::.|:|:|.||.||||
plant   867 CPISSLLHS--PLDESSVRFITGSLVSAIEDIHKNEILFRGSSPELLMLDQSGYLQIVDFRFAKK 929

  Fly   422 LR-DRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPF--YDEQPFGIYEKILS 483
            |. :||:|:||..:|:||||:|.|||..|.||||||||||.||.|..||  :.|.....::||..
plant   930 LSGERTFTICGNADYLAPEIVQGKGHGYAADWWALGVLIYYMLEGEMPFGSWRESELDTFQKIAK 994

  Fly   484 GKIEWERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPP--IL 546
            |::.:.|.:...|:|||.|||..|...|.|: :.|.:.:|:|.||..|.|..:.:::.:.|  |:
plant   995 GQLTFPRVLSSEAEDLITKLLEVDENLRFGS-QGGPESIKKHPWFNGLKWEAISNREFQVPQEII 1058

  Fly   547 PDVHHDGDTKNFDDYPEKDWKPAKAVDQRDLQ 578
            ..:||..:..|.  .|.:..|.....:.:|.|
plant  1059 SRIHHHLENDNV--LPLETSKSLDTTEDQDAQ 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 PTZ00263 262..583 CDD:140289 100/324 (31%)
STKc_PRKX_like 272..563 CDD:270763 94/297 (32%)
AT2G20050NP_179595.5 PP2Cc 123..397 CDD:238083
CAP_ED 491..600 CDD:237999
CAP_ED 617..>714 CDD:237999 7/40 (18%)
PKc_like 797..1054 CDD:419665 87/259 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0616
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24353
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.870

Return to query results.
Submit another query.