DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO2 and AGO2

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_174413.2 Gene:AGO2 / 840016 AraportID:AT1G31280 Length:1014 Species:Arabidopsis thaliana


Alignment Length:65 Identity:15/65 - (23%)
Similarity:26/65 - (40%) Gaps:18/65 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 LLYTLSQSLKAPTSSEGADAVKALFGVNLQSRLHCQESGEESSETESVYSLKCHISHEVNHLHEG 230
            ||..|:|:|       ||:...|..|.       |    :..:::|:....:....||.:|..:|
plant    47 LLLFLTQAL-------GANVCNAADGT-------C----KAGAKSETYAGDEFDPFHEADHYDDG 93

  Fly   231  230
            plant    94  93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134
ArgoL1 554..601 CDD:462567
PAZ 605..719 CDD:239207
Piwi_ago-like 764..1186 CDD:240015
AGO2NP_174413.2 ArgoN 237..306 CDD:465134
ArgoL1 316..366 CDD:462567
PAZ 371..488 CDD:460472
Piwi_ago-like 528..963 CDD:240015
Blue background indicates that the domain is not in the aligned region.

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