Protein Alignment MsrA and msraa

DIOPT Version :10

• Sequence 1: NP_001261879.1
• Gene: MsrA / 39675
• FlyBaseID: FBgn0000565
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_001076362.1
• Gene: msraa / 793910
• ZFINID: ZDB-GENE-041014-344
• Length: 235
• Species: Danio rerio
• Alignment Length: 215
• Identity: 73/215 - (33%)
• Similarity: 100/215 - (46%)
• Gaps: 58/215 - (26%)

  Fly    24 QKELNISPVHDVNVTKAT---------ATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTY 79
            ::.:.:|..||||..:..         ..||||||||||..:...:||..|.|||:||.:..|||
Zfish    39 EQSIKVSAKHDVNGNRTVPPFPEGLQMVLFGMGCFWGAERKFWRQKGVYSTQVGYSGGYTPNPTY 103

  Fly    80 R-----KMGDHTEVLEIDYDPTVISFKELLDLFWNNH----------EYGLTTPIKRQYASLILY 129
            .     |.| ||||:.:.::|..|.|.|||.:||.:|          :.|.|      |.|.|..
Zfish   104 EEVCTGKTG-HTEVVRVVFEPQKIKFSELLKVFWESHNPTQGMRQGNDVGTT------YRSSIYT 161

  Fly   130 HDEEQKQVAHASKLEEQERRAPE---IITTEIASKENFYPAEAYHQKYRLQGHKDLASSLNLSPK 191
            :.:||.:.|..|:.|.|:....|   .|||||...:.||.||.|||:|           |:.:|
Zfish   162 NTQEQLEQALQSREEYQKVLTEEGFGAITTEITMAKEFYYAEDYHQQY-----------LSKNP- 214

  Fly   192 LLQTSYVATKLNGYLAGVGG 211
                       :|| .|:||
Zfish   215 -----------DGY-CGLGG 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MsrA	NP_001261879.1	PMSR	41..174	CDD:460270	60/159 (38%)
msraa	NP_001076362.1	MsrA	60..229	CDD:439995	68/194 (35%)