DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MsrA and MSRA

DIOPT Version :10

Sequence 1:NP_001261879.1 Gene:MsrA / 39675 FlyBaseID:FBgn0000565 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_036463.1 Gene:MSRA / 4482 HGNCID:7377 Length:235 Species:Homo sapiens


Alignment Length:233 Identity:74/233 - (31%)
Similarity:107/233 - (45%) Gaps:64/233 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSVTHPELKDLSTVRNEQKELNISPVHDVNVTKAT---------ATFGMGCFWGAESLYGATRGV 62
            |::..|:    ..:...:::..::..|.||..:..         |.||||||||||..:...:||
Human    28 SNIVSPQ----EALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGV 88

  Fly    63 LRTTVGYAGGSSDLPTYR-----KMGDHTEVLEIDYDPTVISFKELLDLFWNNH----------E 112
            ..|.||:|||.:..|||:     |.| |.||:.:.|.|..:||:|||.:||.||          :
Human    89 YSTQVGFAGGYTSNPTYKEVCSEKTG-HAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGND 152

  Fly   113 YGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRAPE----IITTEIASKENFYPAEAYHQK 173
            :|      .||.|.|.....:|.:.|.:|| |..::...|    .|||:|...:.||.||.|||:
Human   153 HG------TQYRSAIYPTSAKQMEAALSSK-ENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQ 210

  Fly   174 YRLQGHKDLASSLNLSPKLLQTSYVATKLNGYLAGVGG 211
            |           |:.:|            ||| .|:||
Human   211 Y-----------LSKNP------------NGY-CGLGG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsrANP_001261879.1 PMSR 41..174 CDD:460270 60/160 (38%)
MSRANP_036463.1 MsrA 62..231 CDD:439995 69/195 (35%)

Return to query results.
Submit another query.