DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and tmx3

DIOPT Version :9

Sequence 1:NP_524079.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_002939661.2 Gene:tmx3 / 100493559 XenbaseID:XB-GENE-946768 Length:454 Species:Xenopus tropicalis


Alignment Length:362 Identity:88/362 - (24%)
Similarity:165/362 - (45%) Gaps:48/362 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FLAASYVAASAEAEVKVEEGVLVATV-DNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQ 72
            |:.|:..:.|..|.:.|  ..||..: |:||:...| :..||:||||||||||.|.|.:.:...:
 Frog     8 FILATVASTSLLASLPV--SALVEDLDDSFKENRKD-DIWLVDFYAPWCGHCKKLEPVWNEVGIE 69

  Fly    73 LAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKKTGPPA 137
            :....|||::.|:||||...:|.::.|||:||:|..:......|.|.|...||:.:..:..||..
 Frog    70 MRSSGSPIRVGKMDATVHSSIASEFGVRGFPTIKVLKGDMAYNYRGPRTKEDIVEFANRVAGPLI 134

  Fly   138 KDLTSVADAEQFLKDNEIAIIGFFKDLESEEAKTFTKVANALDSFVFGVSSNADVIAKYEA---- 198
            :.|.|....:...|.:.:..:  :..:||...:.:.:||:.|..:.:..|::.||:.||..    
 Frog   135 RPLPSQQMFDHVQKRHSVLFV--YVGVESTLKEKYIEVASELIVYTYFFSASEDVLPKYVTLNEV 197

  Fly   199 ------KDNGVVLFKPFDDKKSVFEGEL----NEENLKKFAQVQSLPLIVDFNHESASKIFGGSI 253
                  ||:...::..::|      |:|    |:|..:.:..:....|     :|     .|.:.
 Frog   198 PAVLVFKDSTYFVYDEYED------GDLSSWVNKERFEGYLHIDGFTL-----YE-----LGDTG 246

  Fly   254 KSHLLFFVSREGGHIE--KYVDPLKEIAKKYRD----DILFVTISSDEEDHTRIFEFFGMNKEEV 312
            |...:..:..:...:|  :.....:::||.|||    |..|..:..::..::.:     |::..:
 Frog   247 KLVAVAVIDEKNNSVEHTRLKSIAQDVAKNYRDHFHRDFQFGHMDGNDYINSLL-----MDELSI 306

  Fly   313 PTIRLIKLEEDMAKYKPESDDLSAETIEAFLKKFLDG 349
            ||..::. ..:...:.|.....:.|.:..|:...|||
 Frog   307 PTFVVLN-TSNQQYFLPSKQIENTEEMIQFINSILDG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_524079.1 ER_PDI_fam 27..474 CDD:273457 83/344 (24%)
tmx3XP_002939661.2 PDI_a_TMX3 27..130 CDD:239298 40/103 (39%)
ER_PDI_fam 29..>346 CDD:273457 81/339 (24%)

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