DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12316 and msl1b

DIOPT Version :10

Sequence 1:NP_648752.1 Gene:CG12316 / 39650 FlyBaseID:FBgn0036483 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_021336014.2 Gene:msl1b / 563262 ZFINID:ZDB-GENE-030131-4491 Length:529 Species:Danio rerio


Alignment Length:614 Identity:122/614 - (19%)
Similarity:219/614 - (35%) Gaps:172/614 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 SESSLLKKQVTFSP---RHLGAATPNAKTGTSKKP-SIKQYKPSSSNATESQRWKEEHRKASAKM 601
            |::.|..|:..|||   ||..:.....:......| ..:::..|..|...            |.:
Zfish     9 SKAGLYSKKCDFSPSQTRHPVSVQRELRDPLCDTPDDTREHLISQKNLER------------ASL 61

  Fly   602 FAKLDAKIKARSEAENVSTSQLTPTTSNASSSTPTKISGTPTRIRS-TQRGQRVALPTPP----A 661
            .:|...::...|||.:|.|..|        ||...::.|..|.::| |..||..|:...|    .
Zfish    62 PSKPGRELIVASEAGSVGTETL--------SSQAKQMGGEGTPVKSKTPFGQTNAIDNKPEFVSM 118

  Fly   662 STH-SSSSPCQIRSASTDNHNYNVDSDYSRRCFSKAAGD---EVSYYNHLLTLQRENIRRRRLNN 722
            ::| :|..|...::|.....:.:..|:..|....|.:|:   :.:....||.||.:.|.:::  .
Zfish   119 NSHINSRDPVGEKNAKETMGSSHEHSEGKRTNMKKISGNPHAQATCLKQLLLLQLDLIEQQQ--Q 181

  Fly   723 QKKKKNRKVSQKVQKKDDKLNMLKQATKRCRKLRALNAKRKNE--VQKLEQ---DLDTIRKSAPH 782
            |.:.|::::.   :.|.|:..:|.:..:..|:|:.|:.:.:::  .|.||:   |.|...:|...
Zfish   182 QLQSKDKEID---ELKSDRDTLLARIERMERRLQLLSKEPRDKRLFQPLERWVPDTDDFWESDLG 243

  Fly   783 KLPIIRLKRCNLKTQKRSLKAEEAPSVQEDILSMNSDRELQEQKKAQKPKRKRYKKVQKEQEN-- 845
            ..|..:..:.:.|.|||.|.|.|.                    |.|:.:.|..:...::.:.  
Zfish   244 DSPQTQASKSSGKVQKRKLSATET--------------------KTQRSRGKSSRTTPQKSDTRG 288

  Fly   846 ----EKYLREQEIIISQSQMVEEDKVEEHHAHEAPSEQQRELDLEHQQFLEEQLLQEEHQLAMHE 906
                ::.||.:|.....|......|.:: ||.|..|::..||         ..:...|..|...|
Zfish   289 PSPCQRELRSKETPEKASTGKSSRKTDQ-HAEEGSSKEADEL---------PYMTTTEMYLCCWE 343

  Fly   907 EEHHQMDDE---QESHEVARLLEDQQPA----EGTHLHV----------ENEMLAEKEQPLIEDD 954
            .....:.::   :|....::.|...|.|    ..|:.:|          ||.|     :||.|:|
Zfish   344 PPDSSLQEDCPKKEEDVASKFLVQIQNALFKRWFTNCYVKTIFPVPSWRENIM-----EPLKEED 403

  Fly   955 DQEADDQNQNEHLSDDQQQEADQQLSIEQPQEHEENQSLSQDPLDEQCTPTPNGKRRK------- 1012
                         :.|..:..|..:.:::..:.|         |||        ||||       
Zfish   404 -------------AADLPESLDDSVFLKRHAKLE---------LDE--------KRRKRWDIQRI 438

  Fly  1013 RRRRFKRRCWTHVKNKKKKQWLIDYPLEFEADPALDTPPIQPEPAPDEQQAELVTGPVSESVAEP 1077
            |.:|..:|....::.||                    |.:..|..|:            .|...|
Zfish   439 REQRMLQRLQQRMEKKK--------------------PNVVQESEPE------------VSSFHP 471

  Fly  1078 VAEPVAEPVSEPFAEQIA--EPIAQPTPE 1104
            ..|.|...:..||...:|  .|:...||:
Zfish   472 DLENVEAIMVTPFLPVVAFGRPLPNLTPQ 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12316NP_648752.1 PHA02666 504..>685 CDD:222914 33/153 (22%)
PTZ00121 <732..995 CDD:173412 53/290 (18%)
PTZ00341 <804..>926 CDD:173534 19/130 (15%)
PRK10819 1051..>1105 CDD:236768 12/56 (21%)
msl1bXP_021336014.2 None

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