DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3919 and madf-5

DIOPT Version :10

Sequence 1:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_497028.1 Gene:madf-5 / 175118 WormBaseID:WBGene00007242 Length:423 Species:Caenorhabditis elegans


Alignment Length:339 Identity:76/339 - (22%)
Similarity:128/339 - (37%) Gaps:100/339 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AINAKICHLVKLHPCLYDRHDDNYLRKST-----VKNAWKEISNEMRNSVKSC-----KERWRNI 70
            |.||::.:.|:.:||||     |:.|:.:     .:..|:.|:   :|...:|     |:||..:
 Worm     6 AFNARLINEVRKYPCLY-----NHSRRGSGDTMERQRLWESIA---KNIDPNCAAEFAKKRWLQL 62

  Fly    71 RSSYARSIK--LHHGANT----YYLNSELK----FLQKHI------------------TPGVPVP 107
            |..|.:.:|  :.:|..|    .|.| :|.    ||:.:|                  ..|.|..
 Worm    63 RDRYRKELKIAIKNGFVTPVRWCYFN-QLSWLDPFLKDNIGQAADEGKKTGKSDSFDEPSGTPFS 126

  Fly   108 LRG--RRSRPKGQEEHDEGDPETPVEAILEMVHSPSFLNSEHAQSRHSTDPASATDVEATQF--- 167
            ..|  ..:..|.:.|.|:.||... .::|:.      |.::.||...|..|....|...||.   
 Worm   127 WFGFPNLNSIKDEMEDDDSDPALE-SSVLDR------LLAQTAQRLDSISPEIENDESGTQSLDG 184

  Fly   168 ----------NNEPSSIMDFEDTV----PAEMRTESDSSE--KE---AKVGEITLYRVPLLEFPK 213
                      ..|...|.| ||.|    |.:::::|::..  ||   |:..:.|.....:.:..:
 Worm   185 NLDGVDGDGDEEEDLKIKD-EDEVEEDGPEKVKSQSEAMAMLKEAISAQSQQQTQQAQQVQQVQQ 248

  Fly   214 TSTR-CIEALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKRRVYDLLGEIFHSEQSA-SSTHPAQP 276
            |..: .:|:| |......|...|..::..|:            .:|.....||::| ....|:.|
 Worm   249 TPQKPSVESL-IAANQARFAHHLAAQLTGMS------------SMLNGARKSEEAAIPPLRPSTP 300

  Fly   277 HPRENVNGTLSTTS 290
            .|      |.||||
 Worm   301 PP------TASTTS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3919NP_001261840.1 MADF 20..100 CDD:214738 24/99 (24%)
BESS 226..260 CDD:460758 4/33 (12%)
madf-5NP_497028.1 MADF 10..98 CDD:214738 23/96 (24%)

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