DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stwl and Adf1

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_001260730.1 Gene:Adf1 / 47082 FlyBaseID:FBgn0284249 Length:274 Species:Drosophila melanogaster


Alignment Length:197 Identity:42/197 - (21%)
Similarity:83/197 - (42%) Gaps:23/197 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EVNLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEVGESVEKCKRRWRQLRNDYTRWCNA 70
            :.:|.|:.:|:....:|||:..||:..:.....|..:|..:|...:||.:||:.||:.:.|....
  Fly    11 QFDLNLIEAVKLNPVIYDRSHYNYKHFVRKAQTWKQIAETLGVPEQKCTKRWKSLRDKFAREMKL 75

  Fly    71 DANRRRNGQRRLAYPLADELR-----FLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGVDHHA 130
            ....|....:::.: |.|.:|     .|.:..|     .:.....|:....:...:....||..|
  Fly    76 CQESRWRYFKQMQF-LVDSIRQYRESLLGKCAN-----GSQSANQVADPSQQQQAQQQTVVDIFA 134

  Fly   131 QASLKERASSTSKL--------VKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLND 187
            |.......:|...|        ..:.:||:.|.|::    |...:|.|..::||.::.::..||.
  Fly   135 QPFNGSATTSAQALTHPHEITVTSDAQLATAVGKDQ----KPYFYEPPLKRERSEEEHSDNMLNT 195

  Fly   188 LE 189
            ::
  Fly   196 IK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738 22/91 (24%)
COG5177 <131..>267 CDD:227504 14/67 (21%)
BESS 604..637 CDD:460758
Adf1NP_001260730.1 MADF 15..95 CDD:214738 20/80 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.