DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and CG3919

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster


Alignment Length:334 Identity:73/334 - (21%)
Similarity:132/334 - (39%) Gaps:83/334 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VNLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEVGESVEKCKRRWRQLRNDYTRWCNAD 71
            :|..:...|:....||||.|:||.::...:|||..:::|:..||:.||.|||.:|:.|.|     
  Fly    17 INAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYAR----- 76

  Fly    72 ANRRRNGQRRLAYPLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGV---------- 126
            :.:..:|..  .|.|..||:||.:|:.....:.....||....::..:..|.|..          
  Fly    77 SIKLHHGAN--TYYLNSELKFLQKHITPGVPVPLRGRRSRPKGQEEHDEGDPETPVEAILEMVHS 139

  Fly   127 -----DHHAQASLKERASSTSKLVKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLN 186
                 ..|||:    |.|:......:|: |:|...|.||....|:            ....|...
  Fly   140 PSFLNSEHAQS----RHSTDPASATDVE-ATQFNNEPSSIMDFED------------TVPAEMRT 187

  Fly   187 DLEESDEPEKVPELDSF----LQSDNEDDECMDEEHLED-----LEGFDFDLEQSNQEKELTPEK 242
            :.:.|::..||.|:..:    |:.......|::...:.|     |:|...:::..|..::|..::
  Fly   188 ESDSSEKEAKVGEITLYRVPLLEFPKTSTRCIEALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKR 252

  Fly   243 SL----------EKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAE--------------- 282
            .:          |::.:.:..:||.        ||..:.|..::|||.:.               
  Fly   253 RVYDLLGEIFHSEQSASSTHPAQPH--------PRENVNGTLSTTSSLSSANPLQHMGLMLQLPK 309

  Fly   283 --SKASKSI 289
              |||||.:
  Fly   310 LVSKASKDL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738 30/86 (35%)
COG5177 <131..>267 CDD:227504 25/154 (16%)
BESS 604..637 CDD:460758
CG3919NP_001261840.1 MADF 20..100 CDD:214738 29/86 (34%)
BESS 226..260 CDD:460758 5/33 (15%)
Blue background indicates that the domain is not in the aligned region.

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