DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and CG4404

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:332 Identity:74/332 - (22%)
Similarity:121/332 - (36%) Gaps:91/332 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEVGESVEKCKRRWRQLRNDYTRWCNADA 72
            |:..::.||.|..|::.|...|.|:...:.||..||:::.::|..|:.|||.:|:.:.|  :...
  Fly    15 NVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLR--SLKL 77

  Fly    73 NRRRNGQRRLAYPLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGVDHHAQASLKER 137
            .|.:.|:.:..|.|:..|:||                 |...|.|..::...|:     ...|..
  Fly    78 ARTQTGRGKRKYYLSKYLQFL-----------------VPFTKSRSCHKQLPGM-----VLRKPG 120

  Fly   138 ASSTSKLVKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLNDLEESDEPEKVPELDS 202
            .::|::...||..|.:       :.|..:.|.|.|.|.|     ||:....:|.|..:....|..
  Fly   121 QAATAQQEDEVVAAEE-------EAKVSDGEMPLDVQVS-----EEEHRRNQEQDREQPTACLPL 173

  Fly   203 FLQSDNEDDECMDEEHLEDLEGFDFDLEQSNQEKE-LTPEKSLEKNNTDSTVSQPEFFVKQTRDP 266
            .|.|       :..||         |...:||:.| :..::||        ||.|...:...   
  Fly   174 RLHS-------IKVEH---------DSSNANQQLERMVSQQSL--------VSVPAAALGNH--- 211

  Fly   267 RLLIIGRKNSTSSFAESKASKSISGDPLETAMEDSGDEYGRDGEKRVTGSDT-TSPTRRPRRAAR 330
                :|..:.|..|                      ..:|....|..|.:.| |||...|:.|..
  Fly   212 ----LGWSDLTQWF----------------------KGHGSGHHKLTTTTTTPTSPPPPPQPATS 250

  Fly   331 ASISFAG 337
            |...|.|
  Fly   251 ALSVFTG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738 25/86 (29%)
COG5177 <131..>267 CDD:227504 29/136 (21%)
BESS 604..637 CDD:460758
CG4404NP_572838.2 MADF 17..103 CDD:214738 26/104 (25%)
BESS 267..301 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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