DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment stwl and LOC110439798

DIOPT Version :9

Sequence 1:	NP_001261839.1	Gene:	stwl / 39581	FlyBaseID:	FBgn0003459	Length:	1037	Species:	Drosophila melanogaster
Sequence 2:	XP_021332041.1	Gene:	LOC110439798 / 110439798	-ID:	-	Length:	273	Species:	Danio rerio

Alignment Length:	262	Identity:	71/262 - (27%)
Similarity:	101/262 - (38%)	Gaps:	57/262 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 AASEVNLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEVGESVEKCKRRWRQLRNDYTRW 67
            ||.|.   |||:|.:...|::|...:||.....|..|..||:.:|.||.:|||||:.:|:.|.|.
Zfish    27 AAEET---LLRAVYRIPLLHNRLRTDYRSTERRERVWRDVAASIGLSVVECKRRWKTIRDRYIRE 88

  Fly    68 CNADANRRRNGQRRLAY-PLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDS-------E 124
            ......::..|.|||.| |..:.|.|||.|:                   |...|.|       |
Zfish    89 RRLCKLKKDLGGRRLHYWPHRESLAFLDAHI-------------------RKRRRPSGAQGPEEE 134

  Fly   125 GVDHHAQASLKER---------ASSTSKLVK-----EVKLASQVRKEKSSQDKRENWENPGDKQR 175
            ..:.|:.|:|:|.         .|.:|:.|.     .:.:.:|::..............||.|..
Zfish   135 QQEEHSSAALQEDKEECVQEECVSDSSRFVSPLNPLPLSIVTQLKPVPQVSPLLLTSLPPGLKVA 199

  Fly   176 SRKKSAEEKLNDLEESDEPEKVPELDSFLQSDNEDDECMDEEHLEDLEGFDFDLEQSNQEKELTP 240
            ....||...| ....|..|..||     |:.....|..:||:.|       |.|......|.|||
Zfish   200 PASSSAPPLL-PASASAGPLNVP-----LEEQQRADGALDEDQL-------FLLSYVPALKRLTP 251

  Fly   241 EK 242
            :|
Zfish   252 QK 253

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
stwl	NP_001261839.1	MADF	11..98	CDD:214738	34/87 (39%)
stwl	NP_001261839.1	BESS	604..637	CDD:281011
LOC110439798	XP_021332041.1	MADF	32..120	CDD:214738	34/106 (32%)
LOC110439798	XP_021332041.1	BESS	233..267	CDD:308542	10/28 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1634040at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920