Protein Alignment Sox21a and sox5

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_021330769.1
• Gene: sox5 / 567413
• ZFINID: ZDB-GENE-000607-13
• Length: 763
• Species: Danio rerio
• Alignment Length: 301
• Identity: 74/301 - (24%)
• Similarity: 105/301 - (34%)
• Gaps: 140/301 - (46%)

  Fly    23 SSNHSHSSSLSPQLPGINLGLGMVGGLGMGMSVGVGSGSGN-TTPPPMP------PADLAVPPAA 80
            |....||:     :|..||..|.       :|...|....| :||||.|      |.:|:..|.|
Zfish   348 SPGAKHST-----VPQANLATGT-------LSPTSGQSEKNRSTPPPKPKDEGAQPLNLSSKPKA 400

  Fly    81 -----PT-PVAPKMHQHTHHHGNSHHNAPTS-------------HSNSNTGSHHNSHD------- 119
                 || |.:|::.......|:..|:||:|             .|:..:..:.|.|:
Zfish   401 SESKSPTSPASPQVPALKLGPGSLKHSAPSSIGGPPSRLSSIDLLSSITSAGYLNDHEAVTKAFQ 465

  Fly   120 ----------------------------------------------------------------- 119
                                                                             
Zfish   466 EARKMKEQLKREEQVLDAKVAAVNSLSLNNGRSEKVRFMEKAALESLSQQLKQSEESKFTHAMMD 530

  Fly   120 ------------------------------HIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKR 154
                                          ||||||||||||::.:|||:.|..|.||||.|||.
Zfish   531 FGISGDSDGSPSVSDSRIFREARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 595

  Fly   155 LGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
            ||:.||.:|..:|:|:.:|..||...|::::|||||:||.|
Zfish   596 LGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPK 636

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	43/179 (24%)
sox5	XP_021330769.1	PRK13042	332..>415	CDD:183854	23/78 (29%)
		HMG-box_SoxD	561..637	CDD:438839	43/76 (57%)