Protein Alignment Sox21a and sox14

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001032769.1
• Gene: sox14 / 557661
• ZFINID: ZDB-GENE-051113-268
• Length: 238
• Species: Danio rerio
• Alignment Length: 239
• Identity: 105/239 - (43%)
• Similarity: 117/239 - (48%)
• Gaps: 55/239 - (23%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            |||||||||||||||||||||||:||||||||||||||||||||:|.:|||:|||||||||.|||
Zfish     6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKS-----PVPGGGGGGGGGGANGGVNAGGAGNS--------GPSGPGS 235
            ||||||||||||||.|.|.     |:|..|......|..........|:|        ..|.|.|
Zfish    71 EHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLPVSATDSLLGSSEKARAFLPPTSAPYS 135

  Fly   236 VGSPKDMQ-------------------PQLSPLGQ--------SLPHLHGHPHQSPYQSHPHHPH 273
            ...|....                   |..|.||.        ..|..|.|.|.||
Zfish   136 FLDPSQFSSSAIQKMTEMPHTLATSTLPYASSLGYQNGAFGSLGCPSQHTHTHPSP--------- 191

  Fly   274 PHPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDP 317
            .:|.:|.....|..:......|:...|      |||:....:||
Zfish   192 TNPGYVVPCNCTAWSASSLQPPVAYIL------FPGMTKSGIDP 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	72/78 (92%)
sox14	NP_001032769.1	HMG-box_SoxB	6..85	CDD:438790	72/78 (92%)
		SOXp	77..>95	CDD:463537	10/17 (59%)