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Protein Alignment Sox21a and sox13
DIOPT Version :10
| Sequence 1: | NP_001261827.1 |
Gene: | Sox21a / 39567 |
FlyBaseID: | FBgn0036411 |
Length: | 407 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001429657.1 |
Gene: | sox13 / 555983 |
ZFINID: | ZDB-GENE-100519-1 |
Length: | 628 |
Species: | Danio rerio |
| Alignment Length: | 110 |
Identity: | 50/110 - (45%) |
| Similarity: | 67/110 - (60%) |
Gaps: | 3/110 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 89 HQHT---HHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSE 150
|..| ||..:|......|...|...|...|..||||||||||||::.:||::.|..|.||||.
Zfish 405 HSRTNEDHHSSDSEGQMAISGVGSFGESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSS 469
Fly 151 ISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
|||.||:.||.::..:|:|:.:|..||...|::.:|||||:||.|
Zfish 470 ISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPK 514
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Sox21a | NP_001261827.1 |
HMG-box_SoxB |
119..198 |
CDD:438790 |
41/77 (53%) |
| sox13 | NP_001429657.1 |
None |
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