Protein Alignment Sox21a and HmgD

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Alignment Length: 98
• Identity: 27/98 - (27%)
• Similarity: 46/98 - (46%)
• Gaps: 16/98 - (16%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            |..|||::|:|:|....|..:.::||.:..:|::||.|..|:.:.:..:.    |||..:|
  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW----EAKAAKA---- 59

  Fly   184 EHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGA 216
             ..||       .:.:.:....||.....||||
  Fly    60 -KDDY-------DRAVKEFEANGGSSAANGGGA 84

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	21/78 (27%)
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	19/79 (24%)